Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Car09g00677 | ATGCAGCTATATCATCATCCGTTCTCTTTGAACAGCCAGAAGGTGAGACTCGCCTTGGAAGAGCAAGGCATCGATTACACGTCGTTTCATGTCAATCCTATCACGGCGAAGAACATGGACGCCTCGTTCTTCAAGATGAACTCAAATGCAAAACTTCCCGTCTTTCAAAACGGTTCCCATGTCATTTTCGACACCATCGAGATAATTCAATATATAGAAAGAATTGCCATTGTCTCCTCGGGGATCGATGACGTAATGCCGAGTAGTCGAGAAGTTGTTGAATGGATGCATAAGATACAAGAATGGAATCCAAAATTTTTCACTCTTGCCCACATTCCCGAGAAGTACCGTCTCGCTGTTACCAAATTTAGAAGGCGGGTAGTGATCGCTCGGATGGCCGAAACTCCCGAAATGGCTGCTACTTACCATCATAAGCTCCGAGAAGCATACGAGACCGAAGACAAACTGAAAAACAAAACCGTTATCAAACAAAGCACGGAACATCTAGTTGCACTTCTTGATGAAATCGAGTCAAAACTAGGCCAAACGTCTTTCTTGGTAGGGGAAGAGTTTACCATGGCCGACGCCGTGTTCATACCCGTGCTGGCTCGGCTCGTTCTGTTGAAGCTGGCCGACGAGTACATCGGTAGCAGACCGAACATTGCAGAGTATTGGATGTTGGTGCAGCAGAGACCAAGCTACAAGAAGGTGATTGGGAAGTACTTCAATGGATGGAGAAAGCATAAAACACTTCTGAAAACTTGGTGTTTTGTTCATATCAGAACCTTGCTGAGGAGATATTGA | 804 | 45.27 | MQLYHHPFSLNSQKVRLALEEQGIDYTSFHVNPITAKNMDASFFKMNSNAKLPVFQNGSHVIFDTIEIIQYIERIAIVSSGIDDVMPSSREVVEWMHKIQEWNPKFFTLAHIPEKYRLAVTKFRRRVVIARMAETPEMAATYHHKLREAYETEDKLKNKTVIKQSTEHLVALLDEIESKLGQTSFLVGEEFTMADAVFIPVLARLVLLKLADEYIGSRPNIAEYWMLVQQRPSYKKVIGKYFNGWRKHKTLLKTWCFVHIRTLLRRY | 267 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 9 | 3975577 | 3976560 | + | Carg20084-RA | Car09g00677 | 154414 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Car09g00677 | 267 | Pfam | Glutathione S-transferase, N-terminal domain | 3 | 74 | IPR004045 | - | |
| Car09g00677 | 267 | ProSiteProfiles | Soluble glutathione S-transferase C-terminal domain profile. | 118 | 251 | IPR010987 | - | |
| Car09g00677 | 267 | Pfam | Glutathione S-transferase, C-terminal domain | 161 | 210 | - | - | |
| Car09g00677 | 267 | ProSiteProfiles | Soluble glutathione S-transferase N-terminal domain profile. | 1 | 80 | IPR004045 | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Car09g00677 | Car-Chr9:3975577 | Car12g00363 | Car-Chr12:2329870 | 1.71E-11 | dispersed | |
| Car04g01134 | Car-Chr4:6545582 | Car09g00677 | Car-Chr9:3975577 | 1.29E-167 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Car09g00677 | K22077 | - | csv:101222476 | 479.944 |