Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Car09g00716 | ATGGGTGCTGACACTGGCCTTGCTATGTTTTGTGGTCTCATTCATAAAATCAAACCCTACTTAGCTATGATCTCCTTGCAATTCGGCTACGCCGGGATGTACATCGTTACCATGCTTTGTTTCAAAAAGGGTATGAACCATTACGTTCTTGCTGTCTATCGACACGTCGTTGCCACCATTGTCATCGCTCCGTTCGCTTTCGTCCTCGAAAGGAAAATAAGGCCGAAGATGACATTCCCGATTCTCGCTCGGATATTGGCACTCGGCTTTCTCGAGCCTGTGTTGGATCAAAATTTGTACTATGTGGGTCTGAAACTTACCTCAGCAACATTCACCTCTGTCACTATCAATATTCTTCCTGCTGTTACCTTCATTATGGCTCTCATTTTCAGGCTAGAAAGAGTGAACTTCAAGAAGGTTCGTAGCATTGCAAAGGTGGTCGGAACATTGGTGACGATCGGCGGAGCAATGGTGATGACTCTATACAAAGGACCCATCGTCGACATCTTCCACGGCCAAGGACGCCATGCCGCCCACCAAAGCAGCGGCAGCGAATCCTCCGACCAGCACTGGGTCCTCGGCACTCTCATGCTCCTTGGCAGCATCGTCGGTTGGTCCGGCTTCTTCATCTTACAATCGTTCACACTGAAGAAATACCCGGCAGAGCTGTCGTTGACCGCCTTGATATGTGTAGCCGGCACGGTGGAGGGCTCCATTGTTACCCTTATTATGGAGCGCGACATGAGCGTCTGGGTCATCGGCTGGGACTCTCGGCTTCTCGCCGCCGTTTACACCGGTGTGATATGCTCTGGACTTGCATATTACATACAAGGCGTGGTAATTCGTGAACGTGGCCCTGTTTTTGTTACCTCTTTTACCCCTCTCTGTATGATTATTACCGCCATCCTTGGCTCCATTGTTTTGGCCGAGCAAATTCACCTCGGAAGCATAATCGGAGCCATTTTCATAGTGATGGGACTATACTTAGTGGTATGGGGCAAAGCCAAGGACCATATAAACAAACCGACGAACCAAAAAAGCGGCGCCGCCACTGAATTACCGATCACCGCCGAGCCGGAAACCACCACCACCACCACTCTCTCCGCCGAGCGCTGCTCTTCCAAGGCTCCACCGGCGTGA | 1140 | 50.7 | MGADTGLAMFCGLIHKIKPYLAMISLQFGYAGMYIVTMLCFKKGMNHYVLAVYRHVVATIVIAPFAFVLERKIRPKMTFPILARILALGFLEPVLDQNLYYVGLKLTSATFTSVTINILPAVTFIMALIFRLERVNFKKVRSIAKVVGTLVTIGGAMVMTLYKGPIVDIFHGQGRHAAHQSSGSESSDQHWVLGTLMLLGSIVGWSGFFILQSFTLKKYPAELSLTALICVAGTVEGSIVTLIMERDMSVWVIGWDSRLLAAVYTGVICSGLAYYIQGVVIRERGPVFVTSFTPLCMIITAILGSIVLAEQIHLGSIIGAIFIVMGLYLVVWGKAKDHINKPTNQKSGAATELPITAEPETTTTTTLSAERCSSKAPPA | 379 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 9 | 4243046 | 4245586 | - | Carg17035-RA | Car09g00716 | 154453 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Car09g00716 | 379 | MobiDBLite | consensus disorder prediction | 343 | 379 | - | - | |
| Car09g00716 | 379 | MobiDBLite | consensus disorder prediction | 343 | 372 | - | - | |
| Car09g00716 | 379 | Pfam | EamA-like transporter family | 21 | 147 | IPR000620 | GO:0016020|GO:0016021 | |
| Car09g00716 | 379 | Pfam | EamA-like transporter family | 193 | 331 | IPR000620 | GO:0016020|GO:0016021 |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Car03g00388 | Car-Chr3:4644935 | Car09g00716 | Car-Chr9:4243046 | 5.40E-17 | dispersed | |
| Car04g01101 | Car-Chr4:6343998 | Car09g00716 | Car-Chr9:4243046 | 1.44E-115 | dispersed | |
| Car07g00952 | Car-Chr7:5393100 | Car09g00716 | Car-Chr9:4243046 | 2.01E-131 | dispersed | |
| Car09g00716 | Car-Chr9:4243046 | Car14g00458 | Car-Chr14:2404580 | 2.43E-115 | dispersed | |
| Car12g00412 | Car-Chr12:2632584 | Car09g00716 | Car-Chr9:4243046 | 1.65E-80 | dispersed | |
| Car15g01207 | Car-Chr15:9375172 | Car09g00716 | Car-Chr9:4243046 | 2.55E-62 | dispersed | |
| Car15g01291 | Car-Chr15:10093872 | Car09g00716 | Car-Chr9:4243046 | 4.44E-41 | dispersed | |
| Car16g00595 | Car-Chr16:3777757 | Car09g00716 | Car-Chr9:4243046 | 1.49E-27 | dispersed | |
| Car17g00150 | Car-Chr17:940964 | Car09g00716 | Car-Chr9:4243046 | 4.15E-20 | dispersed | |
| Car20g00939 | Car-Chr20:10285094 | Car09g00716 | Car-Chr9:4243046 | 1.43E-53 | dispersed | |
| Car04g01163 | Car-Chr4:6685745 | Car09g00716 | Car-Chr9:4243046 | 0 | wgd | |
| Car04g02281 | Car-Chr4:18354766 | Car09g00716 | Car-Chr9:4243046 | 1.09E-08 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Car09g00716 | - | - | csv:101216002 | 655.21 |