Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car09g00746 ATGGCTCAATTTCCCCCAAAAATACCATCTTTCCCTCAAAATTGGCCTCATTTTCCTCCACCTTCAATGCCCAACTTTTCTCCATCTCCTCCGCCCCACCCACCGTCCTCCGCCCACCATACCTCCTCCTGGGTCGACGACTTTCTCGACTTCTCCACCGCCCGCCGCGGCCTTCACCGGAGATCCATCAGCGACTCCATTGCCTTCCTCGAAACCCCATTTTCCGATGAATGTCGCAACTCCTCCTCCTCTTCCGCCGCCGCCGCCGCCGCCGCTTCCGCCTCCGCCCTTCTACATGCTCCTCCTCCCTTCGACCGCCTTGACGACGACCAACTCATGTCCATGTTTTCCGATGACATTTCCATGCCGCTTCCGCCGTCGTCGTCGAATCCCTCCACCCCCTCTGACCAGAATAGTAACAACGACGAGAAAACAACCCCCTTGGAACACCCACCCCCTCCTCCACATCAGTTGAAGAATGAACCTGGTGAGGTCGAAAGCTCCCCTTGTCAACTACCGCAGCTATCTCAACCTCCGCCGTCCTCCACCGCCGCCGGCGATAACACCATTGATCCCAAGCGAGTTAAGAGAATTTTAGCGAATAGACAATCAGCACAAAGGTCGAGAGTCAGAAAATTACAATACATTTCCGAGCTGGAGCGGAGTGTAACTTCATTACAGACTGAAGTATCAGCATTGTCTCCGAGAGTGGCATTTTTAGACCACCAAAGATTGATTCTAAACGTTGATAACAGTGCTCTGAAGCAGAGGATTGCAGCCTTGGCTCAAGATAAGATTTTCAAAGATGCTCATCAAGAGGCATTGAAGAAAGAAATAGAGAGATTGAGGCAAGTTTACCACCAACAAAGTTTGAAGAAAATGGGCAGCAATCAAAACGGGGTGGCGGCGCCGCCGCAGCAGCCACCGTCTTCAGGGGAAGATGCTCCGCCGCAGGCGGCTGAGACGGTGAAGGAGCAGGCTGTAAGTTGA 990 53.13 MAQFPPKIPSFPQNWPHFPPPSMPNFSPSPPPHPPSSAHHTSSWVDDFLDFSTARRGLHRRSISDSIAFLETPFSDECRNSSSSSAAAAAAASASALLHAPPPFDRLDDDQLMSMFSDDISMPLPPSSSNPSTPSDQNSNNDEKTTPLEHPPPPPHQLKNEPGEVESSPCQLPQLSQPPPSSTAAGDNTIDPKRVKRILANRQSAQRSRVRKLQYISELERSVTSLQTEVSALSPRVAFLDHQRLILNVDNSALKQRIAALAQDKIFKDAHQEALKKEIERLRQVYHQQSLKKMGSNQNGVAAPPQQPPSSGEDAPPQAAETVKEQAVS 329
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 4438312 4439871 - Carg17068-RA Car09g00746 154483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car09g00746 329 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 196 211 IPR004827 GO:0003700|GO:0006355
Car09g00746 329 MobiDBLite consensus disorder prediction 75 95 - -
Car09g00746 329 MobiDBLite consensus disorder prediction 287 329 - -
Car09g00746 329 MobiDBLite consensus disorder prediction 1 42 - -
Car09g00746 329 MobiDBLite consensus disorder prediction 1 37 - -
Car09g00746 329 MobiDBLite consensus disorder prediction 117 193 - -
Car09g00746 329 Pfam bZIP transcription factor 193 238 IPR004827 GO:0003700|GO:0006355
Car09g00746 329 MobiDBLite consensus disorder prediction 167 188 - -
Car09g00746 329 Coils Coil 272 292 - -
Car09g00746 329 MobiDBLite consensus disorder prediction 289 306 - -
Car09g00746 329 MobiDBLite consensus disorder prediction 121 146 - -
Car09g00746 329 MobiDBLite consensus disorder prediction 75 90 - -
Car09g00746 329 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 191 243 IPR004827 GO:0003700|GO:0006355
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car01g01054 Car09g00746 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car09g00746 Car-Chr9:4438312 Car11g01492 Car-Chr11:12037042 1.73E-97 dispersed
Car18g00878 Car-Chr18:9724166 Car09g00746 Car-Chr9:4438312 1.59E-20 dispersed
Car01g01054 Car-Chr1:9925086 Car09g00746 Car-Chr9:4438312 6.71E-160 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
4085 PF00170 bZIP_1 1.40E-09 CL0018 Car TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car09g00746 - - csv:101210452 390.193