Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car09g00759 ATGGCATCCGGCGACCAGTCCACTTCCACCGCCTCCGCCGCTGTGGCGTCCAATTCCAAAGAGATCAGGTACAGGGGCGTCAGAAAGAGGCCGTGGGGCCGCTACGCAGCGGAAATCCGGGACCCTCGGAAAAAAACCAGGGTTTGGCTAGGTACATTCAACACGGCGGAGGAGGCGGCGCGTGCTTATGACACGGCGGCGCGTGAATTTAGAGGCGCCGATGCCAAAACCAACTTCCCCGTTCCGAACGGTTTCTTAACCGTCGACAACAACAATAACTTCCGTAAATCCGCTTGTAATAGTCCCAGCCAGTGTAGCACCGTCGAGTCCACTTCCCCGTCACCGGCGCCGTCGGATCCCGCCATCACTGACGTCCACGCGCCGGCCATTTCCCGCCCAATTTTCTTCTTCGACGCGTTTGCCCAGGTGGAGAAGAACAGTGACTTTCGCCGGATAGTTACCGGTGCCGGCGGATCAAGAAGCGATTCTGATTCGTCATCCGTTGTCGATTTCGACAGGACGAGAAAATCTCGGCCGTTAGATTTTGACCTGAATCTTCCGGCTGTGGAAGTTGTTTGA 579 56.82 MASGDQSTSTASAAVASNSKEIRYRGVRKRPWGRYAAEIRDPRKKTRVWLGTFNTAEEAARAYDTAAREFRGADAKTNFPVPNGFLTVDNNNNFRKSACNSPSQCSTVESTSPSPAPSDPAITDVHAPAISRPIFFFDAFAQVEKNSDFRRIVTGAGGSRSDSDSSSVVDFDRTRKSRPLDFDLNLPAVEVV 192
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 4487603 4488181 + Carg17081-RA Car09g00759 154496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car09g00759 192 MobiDBLite consensus disorder prediction 1 17 - -
Car09g00759 192 MobiDBLite consensus disorder prediction 1 20 - -
Car09g00759 192 MobiDBLite consensus disorder prediction 103 118 - -
Car09g00759 192 Pfam AP2 domain 23 72 IPR001471 GO:0003700|GO:0006355
Car09g00759 192 ProSiteProfiles AP2/ERF domain profile. 23 80 IPR001471 GO:0003700|GO:0006355
Car09g00759 192 MobiDBLite consensus disorder prediction 103 124 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car01g01044 Car09g00759 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car09g00759 Car-Chr9:4487603 Car20g00207 Car-Chr20:1191194 8.42E-34 dispersed
Car01g01044 Car-Chr1:9875064 Car09g00759 Car-Chr9:4487603 6.50E-84 wgd
Car11g01596 Car-Chr11:12622845 Car09g00759 Car-Chr9:4487603 1.41E-38 wgd
Car07g00193 Car-Chr7:1089981 Car09g00759 Car-Chr9:4487603 2.16E-38 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
4087 PF00847 AP2 3.90E-14 CL0081 Car TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car09g00759 K09286 - csv:101213540 256.144