Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Car09g00767 | ATGACTGGGAAAGAGATTCTCCACAAGATGAAGGAAAAAGTTGGGCTCGGTTCGTCCGATCCGGACTCAGGAAAAGGAAAGAGCAAGATATCGAAGCATGTCACACATGGTTATCATTTGGTGAAGGGGAAATCGAACCATGCCATGGAAGATTACGTGGTTGCCGAGTTTAAGCAAGTTGATCATCATGAGCTCGGTTTATTTGCAATCTTCGACGGCCATTTGAGCAACTCTATCCCTGATTATTTACAGTCCCATCTATTTGCTAATATCATAAACGAGCCTGATTTCTGGACGAACCCAACGAACGCAGTCAGGAAAGCATACGAGGCAACCGATGCTTACATTTTAGAGAAAGCTGTTGATTTTAGTCATGGGGGTTCAACTGCTGTTACAGCCATATTGATCGACTGTAAGAAACTAGTAGTCGGTAATGTGGGGGACTCCCGTGCAGTTATCTGTCGTAACGGTAAAGCCAGTCAATTATCAATCGATCACGAACCGAGCGTTGAAAGAAAAAGCATCGAGGACAGAGGTGGTTTCGTTTCAAACTTTCCTGGAGATGTTCCACGTGTCGACGGGCAGTTAGCAGTCGCAAGGGCGTTTGGTGATAGGAGCTTAAAGAAACATTTGAGTTCAGAGCCATACGTGGTTGTGGAGACAATCGACGACGAGACCGAATTGGTTATCTTAGCAAGCGACGGATTGTGGAAGGTTATGTCGAACGAGGAAGCTGTCGAGTCGATCAGGCATCTGAAAGACGCTCAAGCAGCTGCCAAACACCTGACAGAAGAGGCCCTTAAGAGGAAGAGCAGAGATGATATTTCTTGTATAGTTGTGAGATTTCTGTGA | 852 | 45.66 | MTGKEILHKMKEKVGLGSSDPDSGKGKSKISKHVTHGYHLVKGKSNHAMEDYVVAEFKQVDHHELGLFAIFDGHLSNSIPDYLQSHLFANIINEPDFWTNPTNAVRKAYEATDAYILEKAVDFSHGGSTAVTAILIDCKKLVVGNVGDSRAVICRNGKASQLSIDHEPSVERKSIEDRGGFVSNFPGDVPRVDGQLAVARAFGDRSLKKHLSSEPYVVVETIDDETELVILASDGLWKVMSNEEAVESIRHLKDAQAAAKHLTEEALKRKSRDDISCIVVRFL | 283 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 9 | 4525188 | 4528807 | + | Carg17089-RA | Car09g00767 | 154504 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Car09g00767 | 283 | ProSiteProfiles | PPM-type phosphatase domain profile. | 35 | 282 | IPR001932 | - | |
| Car09g00767 | 283 | Pfam | Protein phosphatase 2C | 47 | 275 | IPR001932 | - | |
| Car09g00767 | 283 | ProSitePatterns | Glycosyl hydrolases family 5 signature. | 87 | 96 | IPR018087 | GO:0004553|GO:0005975 | |
| Car09g00767 | 283 | MobiDBLite | consensus disorder prediction | 11 | 30 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Car09g00767 | Car-Chr9:4525188 | Car11g01601 | Car-Chr11:12750873 | 1.71E-134 | dispersed | |
| Car11g01599 | Car-Chr11:12642670 | Car09g00767 | Car-Chr9:4525188 | 2.91E-08 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Car09g00767 | K17506 | - | csv:101215129 | 507.294 |