Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car09g00794 ATGCTTCTCCCTCTCACAGCCTCAAAACAGGCCCCTGAAGTTCTGTGTTCGTCAACATCAAGCGGCTCTGTTTTGATCGCCGATCCGATCATCAAACATAAAAACAGAACCCTTCAAAAATCTCCTCCCACTATGACCCACTTTCTCGAACCAAGATTCCACCAAACCCCATTTCCCCCCCTTCTCCGCCGTATCCCCAAATCTCCACCGTCCATTTCAATCCGATGCCGCGGCGGCGGCGCCCGCGACCTCCAATCTCGATTAGACTCCATCAACAACACCCAGAAGCTCACTGAAGCCATGAAGCTCGTCTCCGCCGCCAAAGTCCGCCGAGCCCATGAAGCCGTAATCAACAGTCGCCCCTTTGCCCAATCCCTCGCCCAATTTCTCCATTTCATCACCCAACAAATCCAACCACACGAAATCGATTTCCCCTTTCTAAACCCTGCACCCGTCGGAAAAGTCGCCCTCGTCGTCTTCACCGGCGACCGGGGACTCTGTGGGGGTTTCAACGCTTCCGTGATAAAAACAGCCGACACCCGATTGGCCGAATTGAAAAATCTCGATCTGGGTCACATCCTAATCAGCGTTGGAAAAAAGGGTAACTCGCATTTCCGCCGCCGGTCCGACGTTCAAGTCGATAAATACATAACCGGCTGCGGCGGCGGTTCAGTACCGACAGCAAAAGAAGCACAAACCATTGCAGACATTGTGTTTTCTCTGTTCATCAGCGAAGAAGTGGACAAAGTGGAACTAATTTACACAAAATTCGTTTCGTCGCTGAAATCTGAGCCTGTGATTGAGACATTGCTGCCATTGTTGGGCGATGGGGAAGGCATGGGAGATGGGGGGTTTAGATTGACAACGAAGGAGGGGAAATTGAAGGTGGAGAGAGAGGGGAAAAGGGGGAATTTGGAGGAAATTCCGGCATTGTTGGAGTTCGAACAAGACCCAGTTCAGATCTTGGATGGGATGATAGCTCTGTATTTGAACAGCCAGATTTTGAGGGCTTTGCAGGAATCCATGGCGAGTGAGGTGGCAGCGAGGATGAACGCCATGAGTAATGCTTCTGAGAATGCTCTGGAGTTGAAGAACTCTGTTTTGGTTGCTTATAATCGAGAGAGACAGGCTAAGATTACTGGGGAAATTCTGGAAATTGTTGCTGGAGCTGAGGCTCTTCAAGGATTTTGA 1191 50.38 MLLPLTASKQAPEVLCSSTSSGSVLIADPIIKHKNRTLQKSPPTMTHFLEPRFHQTPFPPLLRRIPKSPPSISIRCRGGGARDLQSRLDSINNTQKLTEAMKLVSAAKVRRAHEAVINSRPFAQSLAQFLHFITQQIQPHEIDFPFLNPAPVGKVALVVFTGDRGLCGGFNASVIKTADTRLAELKNLDLGHILISVGKKGNSHFRRRSDVQVDKYITGCGGGSVPTAKEAQTIADIVFSLFISEEVDKVELIYTKFVSSLKSEPVIETLLPLLGDGEGMGDGGFRLTTKEGKLKVEREGKRGNLEEIPALLEFEQDPVQILDGMIALYLNSQILRALQESMASEVAARMNAMSNASENALELKNSVLVAYNRERQAKITGEILEIVAGAEALQGF 396
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 4741420 4742610 - Carg17116-RA Car09g00794 154531
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car09g00794 396 Hamap ATP synthase gamma chain [atpG]. 78 393 IPR000131 GO:0015986|GO:0045261|GO:0046933
Car09g00794 396 Pfam ATP synthase 82 393 IPR000131 GO:0015986|GO:0045261|GO:0046933
Car09g00794 396 ProSitePatterns ATP synthase gamma subunit signature. 379 392 IPR023632 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car03g00485 Car-Chr3:5080403 Car09g00794 Car-Chr9:4741420 6.30E-130 dispersed
Car09g00794 Car-Chr9:4741420 Car18g00282 Car-Chr18:1655228 1.37E-29 dispersed
Car09g00794 Car-Chr9:4741420 Car13g00599 Car-Chr13:7758256 5.37E-140 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car09g00794 K02115 - csv:101214682 548.895