Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car09g00807 ATGAAGCTTGTTTCAATGTTTCTGGTTCTGTCTGGCGTATTGTTCTTGTGTATTGGATCCTGCGCCGCTTTCACTCCCATTGATAATTATTTGATATCATGTGGTTCTACACAAAACATCACGTTTCAAGGAAGAACTTATGTTCCTGATTCTGGACATTCCTTGTTCGCCATTGATGGTGGAAGCTCTGTTGTTGTTAGTTCTAAAGGCACAAGTGAGCCATCTCCAATCTATCAATCTGCTCGGGTTTTCACCGGCATTGCATCGTATAAATTCGATATCAAGAAAGAAGGTCGGCATTGGGTTCGGTTGTACTTTTATCCTATTCCGAAGTCGAAGCGGAATCTGGCATCTGCGTCGATTACTGTTGTTACTGAAAAGTTTGTGTTGTTGAATAACTTCACTTTCAAGAACTATAATGGTTCTTTTATGTTCAAGGAGTATGCAATCAATGTGACTTCGGATTCCTTGACGCTTACTTTCATCCCGTTTAATGGTTCGGTATCGTTTGTTAATGCGATCGAGGTTGTTTCGATGCCTGATGAGCTGATACCTGATCAAGCATTGGCTTTGAATCCATCTGCTCCGTTTAGCGGTATCTCTGAACTTGCTTTCGAAACTGTTTATCGACTAAACATGGGAGGTCCTTTACTCACTTCGCAAAATGATACACTTGGAAGGACTTGGGAGAACGATATGAAATACCTCCATGTCAATAGTTCTGCAGTGAATGTCTCGGCTAACCCGGGGAGTATAAAGTATCATGCCGGTGTTACGCCAGAAACTGCACCGAACTTGGTTTATGCTACTGCCGATGCCATGGGAGACCCGAATGTACCGAACGTGAACTTTAACTTGACTTGGGTTTTCTCTGTCGAGCCAAATTTTCAATACTTCGTTCGAGTACACTTTTGTGATATCATGAGCAAGGCTCTTAATAGTCTGGTTTTCAATCTTTACATCAATTCTGATAATGCTTTGGGAAGCTTCGATCTATCGTCGTTAACGGGTGACTTGGGCGTGCCTTATTACAAAGACTTCATTTCGAACTCAGCAGATTCGGCTACTTTGACCGTTAGTGTCGGTCCAGATACGATGGCAGACATCACCAATGCAACCATGAATGGCTTGGAGATCATGAAAATGAACAATCGAGTCGGGAGCTTGGATGGAACTTCGTCCGTTGAAAGCCTTTTGCCGAATGCGCCCTCGAAGAAGAACAATATAGCAATAATTGTTGGTTCTGTTTCGGGAGCCATAGTAGCCATTGCTTTGCTCGTCTTGTGTTACTGCTGTTTCGTACGTCGTAAGTCGAAGTCTACTCAACCAGCACAACCATGGCTGCCTTTGCCCTTATATGGGAACTCTCAAACCATGACAAAGGTGTCAACAACTTCTCAAAAGAGTGGAACTGCAAGCTTCCTTTCATTGACTTCCTCCAGTCTTGGCAGATTCTTCTCGTTTCAGGAAATTCTCGACGCTACGAACAAATTCGACGAAAATCTACTCCTTGGAGTTGGCGGTTTCGGTAGAGTTTACAAGGGAACACTTGAAGATGGTGTAAAGGTTGCTGTTAAAAGAGGTAACCCGAGATCAGAACAAGGTCTTGCTGAATTTCGAACCGAAATCGAAATGTTATCAAAGCTCAGACATCGTCACCTAGTGTCTCTTATTGGCTACTGTGACGAACGATCGGAAATGGTTCTTGTCTACGAATACATGGCAAATGGACCTCTCAGGAGTCACTTGTATGGAACCGATCTACCACCGTTGTCGTGGAAGCAACGACTTGATATTTGCATCGGTGCTGCTAGAGGGCTTCATTATCTTCACACTGGTGCAGCTCAAAGCATTATACACCGAGATGTCAAAACCACGAACATTCTCTTGGACGAGAATTTCGTCGCCAAAGTTGCAGATTTCGGTCTCTCAAAAACCGGACCATCTCTGGATCAGACTCATGTTAGTACTGCTGTCAAGGGTAGTTTTGGTTACCTCGACCCCGAATACTTCAGACGACAGCAGCTGACCGAGAAGTCCGACGTATATTCATTCGGGGTCGTGCTAATGGAAGTTCTCTGTACAAGGCCAGCTCTAAACCCTGTTCTGCCTAGAGAACAAGTCAATATAGCAGAATGGGCAATGACTTGGCAGAAGAAAGGCATGCTAGATAACATCATGGACCAAAATCTGGTAGGGAAAGTTAATCCAGCATCGCTTAAGAAGTTCGGTGAAACAGCAGAGAAATGTTTAGCCGAGTATGGTGTCGACAGGCCGTCCATGGGCGACGTCCTGTGGAACCTGGAATACGCTCTTCAGCTCGAGGAAACATCGTCTGCTCTAATGGAACCCGAAGACAACAGCACGAACCACATCCCTACCATCCAACTGACTCCACTTGAGCCATTTGATAATAGTGTAAGCATGATTGATGGAGGGAACTCGGGCACCGACGACGACGCAGAAGACGTTGCAACGAGTGCAGTGTTTTCGCAGCTCGTAAATCCTCGTGGGAGATGA 2520 44.84 MKLVSMFLVLSGVLFLCIGSCAAFTPIDNYLISCGSTQNITFQGRTYVPDSGHSLFAIDGGSSVVVSSKGTSEPSPIYQSARVFTGIASYKFDIKKEGRHWVRLYFYPIPKSKRNLASASITVVTEKFVLLNNFTFKNYNGSFMFKEYAINVTSDSLTLTFIPFNGSVSFVNAIEVVSMPDELIPDQALALNPSAPFSGISELAFETVYRLNMGGPLLTSQNDTLGRTWENDMKYLHVNSSAVNVSANPGSIKYHAGVTPETAPNLVYATADAMGDPNVPNVNFNLTWVFSVEPNFQYFVRVHFCDIMSKALNSLVFNLYINSDNALGSFDLSSLTGDLGVPYYKDFISNSADSATLTVSVGPDTMADITNATMNGLEIMKMNNRVGSLDGTSSVESLLPNAPSKKNNIAIIVGSVSGAIVAIALLVLCYCCFVRRKSKSTQPAQPWLPLPLYGNSQTMTKVSTTSQKSGTASFLSLTSSSLGRFFSFQEILDATNKFDENLLLGVGGFGRVYKGTLEDGVKVAVKRGNPRSEQGLAEFRTEIEMLSKLRHRHLVSLIGYCDERSEMVLVYEYMANGPLRSHLYGTDLPPLSWKQRLDICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDENFVAKVADFGLSKTGPSLDQTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLMEVLCTRPALNPVLPREQVNIAEWAMTWQKKGMLDNIMDQNLVGKVNPASLKKFGETAEKCLAEYGVDRPSMGDVLWNLEYALQLEETSSALMEPEDNSTNHIPTIQLTPLEPFDNSVSMIDGGNSGTDDDAEDVATSAVFSQLVNPRGR 839
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 4886675 4889194 + Carg12761-RA Car09g00807 154544
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car09g00807 839 Pfam Protein tyrosine and serine/threonine kinase 503 764 IPR001245 GO:0004672|GO:0006468
Car09g00807 839 Pfam Malectin-like domain 32 382 IPR024788 -
Car09g00807 839 ProSiteProfiles Protein kinase domain profile. 498 771 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car09g00807 839 ProSitePatterns Protein kinases ATP-binding region signature. 504 526 IPR017441 GO:0005524
Car09g00807 839 ProSitePatterns Serine/Threonine protein kinases active-site signature. 618 630 IPR008271 GO:0004672|GO:0006468
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car01g01013 Car09g00807 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car02g00610 Car-Chr2:4609613 Car09g00807 Car-Chr9:4886675 0 dispersed
Car03g00604 Car-Chr3:5614714 Car09g00807 Car-Chr9:4886675 8.91E-75 dispersed
Car03g01314 Car-Chr3:10021723 Car09g00807 Car-Chr9:4886675 0 dispersed
Car04g00230 Car-Chr4:1279295 Car09g00807 Car-Chr9:4886675 0 dispersed
Car07g00048 Car-Chr7:325795 Car09g00807 Car-Chr9:4886675 1.21E-61 dispersed
Car08g00532 Car-Chr8:3334465 Car09g00807 Car-Chr9:4886675 0 dispersed
Car09g00807 Car-Chr9:4886675 Car17g00766 Car-Chr17:6777947 0 dispersed
Car20g00382 Car-Chr20:2130744 Car09g00807 Car-Chr9:4886675 5.98E-107 dispersed
Car01g01013 Car-Chr1:9662947 Car09g00807 Car-Chr9:4886675 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
89098 PF12819 Malectin_like 1.80E-39 CL0202 Car PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car09g00807 - - csv:101215627 1567.75