Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Car09g00813 | ATGATGTTATCTGCATCGCCATCGACGATAGTTCGAAGCTCACTGGAGGAAATGCTTGATTCTCTTCGACGAAGGGATGAGATTGAGATACCTAAAGACTTGCCGCCGGCATTGCCGTCTCGGCCTACTTCCAAGGCTCGGATTCCGCCGCTGCGGCGGGCTTTACCCGTTAATTTCAAGGTTAATGGCGACGGTTCCTCTGAGTGCTGTGTTAATGGTTTCAATGGAAGGGAAGATCCATTGAGGAAGGAGAATGGTCTGGCTAACTTTGCATTAAGGAGAGTGAAGAGAGATCAAGGCGATGAATCGCCTTACTTGGTTGCTTCAGAGAAGGATAATGAAGATCAAGTGAATGGTCCGTATGGTTCTTCTCCAGAAGGGTCTAACTGGGAGGAGATTATCAGCTATTTTCTCCATAAGAAACTCCGGGTTTGGTGTCAAATTCCATCTGGACAATGGGAGTTAGGAACTATACAATCAAACAGTGGGGCTGAGGCATCTGTCATGCTCTCAAACAATAAGGTTATTAACGTTTCGACGGTAGATCTTTTACCTACGAATCCCGATATCGTGGAGGGGGTTGATGATCTTGTACAGCTTGGTTATTTGAACGAGCCCTCGGTTGTTAACAGTCTTCAGCAACGATTTTCTCGAGATGAAATTTATTGTAATGCAGGGTCAGTTTTGATTGCTGTTAATCCCTTGAAAGACACTATGAAGTATGGAGATGGATTGATTACAGCTTATAGAGAGAGAGTCATGAATGACCCTCATGTTTATGCTGTAGCAGATGCTGCCTATTCTGGGATGATGCAAGATGAAGTTAACCAATCTATTATCATCAGTGGTGAAAGTGGAGCAGGAAAAACTGAGACAGCAAAAGCTGCACTTCAGTACCTGACTGCTCTTGGCGGTGGTAGTGGCATAGTCGATAGAATCCCACGGGCTAACGTTATCCTCGAAGCATTTGGGAATGCTAAAACCTCCAGGAACAACAATGCCAGCAGATTTGGGAAGCTGATTGAAATTCTTTTTAGCAGAACAGGGAAGATATGTGGTGCTTCGAGAGTCGTTCAGCTGGTCAATGGCGAGAGATCGTTCCATGTCTTCTATCAACTTTGTGCTGGAGCGCCATCTACACTTAAAGAGAAATTGAATCTCAGAATGGCCAGTGAGTACAGTTACCTTAATCACAGTGAATGCCTCGTGATCGGTGGTGTGGACGATGCACAGAAATTCCATGTTCTTGTGGAAGCTCTAGATATGCTTCAATTCACAAAAGAAGATCAAGAGCATGCATTTCGTTTGCTTGCTGCAGTTTTGTGGATAGGGAACATTACGTTTCAAACGATTAATAGTGAAAATCATGTGGAGGTCGTCATGGCTAATGAAGCGGTCGCAAACGCTGCCGAGCTGATGGGTTGCAGTCCTAATGAGCTTAAGTTAGTTTTGTCAACTCCAACATGCAATCGGACATTACGACAGGCAACTGATGCGAGAGATGCATTGGCAAAATTCATCTATGCAAGCTTGTTTGACTGGCTTGTAGAACAGATCAATAACTCACTTAAACCAAGAAGGGAGCAGTCTGGAAGATCCATAAATATCCTCGACTTCTACGGGTTTGAGTCACTTAAGAAGAACGGCTTTGAACAGTTCTGTATCAATTATGCAAATGAAAGACTGCAGCAGCATTTTATTCGGCACCTGTTCAAACTTCAGCAGGAGGACTACGAATTTAATGGGGTCGATGGCACCAAACTCAACTTCAAAGACAATCAAGAGTGTTTGAATCTTATCGAGAAGAAACCTATCGGAGTTCTAGCTTTGTTGGACGAAGAGTTGAGTTTTCCCAAGGCTACAGATCTGACATTTGCTAATAAACTAAAGCAACACTTCAAATCTCATTCTTGCTTTAAAGGCGAGAGAGGCAGGGCTTTTGGCGTTCGCCATTATGCTGGAGAGGTTGTATACGATACCAATGGGTTTTTGGAAAAGAATAGAGATATGCTGCATTCAGATTCCATCCAACTCTTTTCATCATGTTCTTGCAAGCTATTGCAATTATTTGCCTCAAAAATTGTTAACCATTCCCACAAACCAACAGTTTCAATGTGTTCTACAGAAGTAGTACAATCTCCCGAGCCAGGCACTGGTACCAAGTACAAGGTTCTACTATGTGACCTATTTCGTAAATTGGAGCGCACCGGTCATCATTTCATTTGTTGCATAAGACCAAACAGGAATCAAGTTTGTGGCGTATTTGAGGAGGATCTCGTCTTACAGCAGCTTAGATACTGTGGAATTTTGGAGGTTGTCAGAATTTCAAGATCTGGTTATCCTACCAGAATGATGCATCAAGAATTTGCTGAAAGGTTCGGATTCTTCCTTAAAAAAGCTGGTGTATCCCGAGATCCGTTGAGTATATCAATGGCTGTTTTGCAACGATTTAACGTCCACCCCCATATGTACCATGTTGGTTATACCAAGCTATTTTTCCGAGCTGGGCAGATTAGGGCATTGGAGGAAAGGAGGAAGGAAGTTGTACAAGGCGTCCTAGCGGTTCAAAAGTACTTTCGTGGTTGCCGTTCCCGTGGCCACTTCCTTCAACTTAAGCAAGCAGCAACTACCTTACAATCACTTATTCGTGGCGAAAATGCCAGAAGGAGATGTACCGTTAATGTGCCGAGGTTCTCATTCGTTGTTTATGCTTCCGGTGTTCCTAAGAAAGTTTACGAGCTGCAAGCAGTCATACGAATACAATCGGCTATACGTGGATCGTTGACTCGAAAGCATTACAAGAGCATACTGAGCTCTTTTCGAGAAAACAGAATGTCTAAACTGAACGCAGACAGGAGAGCTTCAGAGGACAAACTTCAAGAACAGGTTGAATCCCTAACCACAACTGTGGGTGAGCTTCAAAAGAGGGTTGTGATGGCAGAAGCAGCCATGGAGAAAAAGGAAGAGGAAAATGCTGCACTGAGGGAGAAAGTAAAGCAATTTGAGTGTATGCGGTCAGAATATGATGCCAAGATGAAATCCATGGAGGATATGTGGCAAAAGCAGACGGCTTCTTTGCAAATGAGTCTTGCTGTTGCTAAAAGGACTCTTGCTGCTGCTGAAAATGTAGCCTGTCCGCTCGGAAGAGTTGATGTTGCTAATTCACCGCCTCACTATTACGATTCTGAGGATATGACGTCGATGGGATCTCGAACTCCCGGTGGTACCACGCCTGTAAAAGCCTTTGGAATCTCTGAGGTTGGAGCAGGGCGAGAAATGAACGGTGCTTTATTTGCAGTGAGCACTCTTGTAAGGGAATTTGAACAGAGAAGAATCGCATTTGATAACGATGCGAAAGCTTTAATTGAATCGAAATCAAGTCATGCACAAACACGGTCTAATATGAATCCAGAAGAAGAATACCGTAAAATTAAAGTCCGATTTGAAGCATGGAAGAAAGAGTACAAGGTAAGATTACGGGAAATGAAAGGAAAGGTTCATAAATACGGTCATTTTGAGGTCGATAAACTTCGTCGAAAATGGTGGGGGAAGTTGAGCTCAAGATCATCATCATAG | 3576 | 43.48 | MMLSASPSTIVRSSLEEMLDSLRRRDEIEIPKDLPPALPSRPTSKARIPPLRRALPVNFKVNGDGSSECCVNGFNGREDPLRKENGLANFALRRVKRDQGDESPYLVASEKDNEDQVNGPYGSSPEGSNWEEIISYFLHKKLRVWCQIPSGQWELGTIQSNSGAEASVMLSNNKVINVSTVDLLPTNPDIVEGVDDLVQLGYLNEPSVVNSLQQRFSRDEIYCNAGSVLIAVNPLKDTMKYGDGLITAYRERVMNDPHVYAVADAAYSGMMQDEVNQSIIISGESGAGKTETAKAALQYLTALGGGSGIVDRIPRANVILEAFGNAKTSRNNNASRFGKLIEILFSRTGKICGASRVVQLVNGERSFHVFYQLCAGAPSTLKEKLNLRMASEYSYLNHSECLVIGGVDDAQKFHVLVEALDMLQFTKEDQEHAFRLLAAVLWIGNITFQTINSENHVEVVMANEAVANAAELMGCSPNELKLVLSTPTCNRTLRQATDARDALAKFIYASLFDWLVEQINNSLKPRREQSGRSINILDFYGFESLKKNGFEQFCINYANERLQQHFIRHLFKLQQEDYEFNGVDGTKLNFKDNQECLNLIEKKPIGVLALLDEELSFPKATDLTFANKLKQHFKSHSCFKGERGRAFGVRHYAGEVVYDTNGFLEKNRDMLHSDSIQLFSSCSCKLLQLFASKIVNHSHKPTVSMCSTEVVQSPEPGTGTKYKVLLCDLFRKLERTGHHFICCIRPNRNQVCGVFEEDLVLQQLRYCGILEVVRISRSGYPTRMMHQEFAERFGFFLKKAGVSRDPLSISMAVLQRFNVHPHMYHVGYTKLFFRAGQIRALEERRKEVVQGVLAVQKYFRGCRSRGHFLQLKQAATTLQSLIRGENARRRCTVNVPRFSFVVYASGVPKKVYELQAVIRIQSAIRGSLTRKHYKSILSSFRENRMSKLNADRRASEDKLQEQVESLTTTVGELQKRVVMAEAAMEKKEEENAALREKVKQFECMRSEYDAKMKSMEDMWQKQTASLQMSLAVAKRTLAAAENVACPLGRVDVANSPPHYYDSEDMTSMGSRTPGGTTPVKAFGISEVGAGREMNGALFAVSTLVREFEQRRIAFDNDAKALIESKSSHAQTRSNMNPEEEYRKIKVRFEAWKKEYKVRLREMKGKVHKYGHFEVDKLRRKWWGKLSSRSSS | 1191 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
9 | 4925737 | 4933303 | + | Carg12767-RA | Car09g00813 | 154550 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Car09g00813 | 1191 | ProSiteProfiles | Myosin N-terminal SH3-like domain profile. | 139 | 188 | IPR004009 | GO:0003774|GO:0005524|GO:0016459 | |
Car09g00813 | 1191 | MobiDBLite | consensus disorder prediction | 101 | 126 | - | - | |
Car09g00813 | 1191 | ProSiteProfiles | Myosin motor domain profile. | 192 | 846 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
Car09g00813 | 1191 | Pfam | Myosin head (motor domain) | 194 | 834 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
Car09g00813 | 1191 | ProSiteProfiles | IQ motif profile. | 913 | 942 | IPR000048 | GO:0005515 | |
Car09g00813 | 1191 | MobiDBLite | consensus disorder prediction | 27 | 46 | - | - | |
Car09g00813 | 1191 | Pfam | IQ calmodulin-binding motif | 873 | 891 | IPR000048 | GO:0005515 | |
Car09g00813 | 1191 | Pfam | IQ calmodulin-binding motif | 915 | 934 | IPR000048 | GO:0005515 | |
Car09g00813 | 1191 | ProSiteProfiles | IQ motif profile. | 871 | 899 | IPR000048 | GO:0005515 | |
Car09g00813 | 1191 | Coils | Coil | 956 | 1004 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Car04g01353 | Car-Chr4:7834978 | Car09g00813 | Car-Chr9:4925737 | 0 | dispersed | |
Car09g00813 | Car-Chr9:4925737 | Car18g00742 | Car-Chr18:8498004 | 0 | dispersed | |
Car16g00591 | Car-Chr16:3709758 | Car09g00813 | Car-Chr9:4925737 | 0 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Car09g00813 | K10357 | - | csv:101210624 | 1873.6 |