Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car09g00813 ATGATGTTATCTGCATCGCCATCGACGATAGTTCGAAGCTCACTGGAGGAAATGCTTGATTCTCTTCGACGAAGGGATGAGATTGAGATACCTAAAGACTTGCCGCCGGCATTGCCGTCTCGGCCTACTTCCAAGGCTCGGATTCCGCCGCTGCGGCGGGCTTTACCCGTTAATTTCAAGGTTAATGGCGACGGTTCCTCTGAGTGCTGTGTTAATGGTTTCAATGGAAGGGAAGATCCATTGAGGAAGGAGAATGGTCTGGCTAACTTTGCATTAAGGAGAGTGAAGAGAGATCAAGGCGATGAATCGCCTTACTTGGTTGCTTCAGAGAAGGATAATGAAGATCAAGTGAATGGTCCGTATGGTTCTTCTCCAGAAGGGTCTAACTGGGAGGAGATTATCAGCTATTTTCTCCATAAGAAACTCCGGGTTTGGTGTCAAATTCCATCTGGACAATGGGAGTTAGGAACTATACAATCAAACAGTGGGGCTGAGGCATCTGTCATGCTCTCAAACAATAAGGTTATTAACGTTTCGACGGTAGATCTTTTACCTACGAATCCCGATATCGTGGAGGGGGTTGATGATCTTGTACAGCTTGGTTATTTGAACGAGCCCTCGGTTGTTAACAGTCTTCAGCAACGATTTTCTCGAGATGAAATTTATTGTAATGCAGGGTCAGTTTTGATTGCTGTTAATCCCTTGAAAGACACTATGAAGTATGGAGATGGATTGATTACAGCTTATAGAGAGAGAGTCATGAATGACCCTCATGTTTATGCTGTAGCAGATGCTGCCTATTCTGGGATGATGCAAGATGAAGTTAACCAATCTATTATCATCAGTGGTGAAAGTGGAGCAGGAAAAACTGAGACAGCAAAAGCTGCACTTCAGTACCTGACTGCTCTTGGCGGTGGTAGTGGCATAGTCGATAGAATCCCACGGGCTAACGTTATCCTCGAAGCATTTGGGAATGCTAAAACCTCCAGGAACAACAATGCCAGCAGATTTGGGAAGCTGATTGAAATTCTTTTTAGCAGAACAGGGAAGATATGTGGTGCTTCGAGAGTCGTTCAGCTGGTCAATGGCGAGAGATCGTTCCATGTCTTCTATCAACTTTGTGCTGGAGCGCCATCTACACTTAAAGAGAAATTGAATCTCAGAATGGCCAGTGAGTACAGTTACCTTAATCACAGTGAATGCCTCGTGATCGGTGGTGTGGACGATGCACAGAAATTCCATGTTCTTGTGGAAGCTCTAGATATGCTTCAATTCACAAAAGAAGATCAAGAGCATGCATTTCGTTTGCTTGCTGCAGTTTTGTGGATAGGGAACATTACGTTTCAAACGATTAATAGTGAAAATCATGTGGAGGTCGTCATGGCTAATGAAGCGGTCGCAAACGCTGCCGAGCTGATGGGTTGCAGTCCTAATGAGCTTAAGTTAGTTTTGTCAACTCCAACATGCAATCGGACATTACGACAGGCAACTGATGCGAGAGATGCATTGGCAAAATTCATCTATGCAAGCTTGTTTGACTGGCTTGTAGAACAGATCAATAACTCACTTAAACCAAGAAGGGAGCAGTCTGGAAGATCCATAAATATCCTCGACTTCTACGGGTTTGAGTCACTTAAGAAGAACGGCTTTGAACAGTTCTGTATCAATTATGCAAATGAAAGACTGCAGCAGCATTTTATTCGGCACCTGTTCAAACTTCAGCAGGAGGACTACGAATTTAATGGGGTCGATGGCACCAAACTCAACTTCAAAGACAATCAAGAGTGTTTGAATCTTATCGAGAAGAAACCTATCGGAGTTCTAGCTTTGTTGGACGAAGAGTTGAGTTTTCCCAAGGCTACAGATCTGACATTTGCTAATAAACTAAAGCAACACTTCAAATCTCATTCTTGCTTTAAAGGCGAGAGAGGCAGGGCTTTTGGCGTTCGCCATTATGCTGGAGAGGTTGTATACGATACCAATGGGTTTTTGGAAAAGAATAGAGATATGCTGCATTCAGATTCCATCCAACTCTTTTCATCATGTTCTTGCAAGCTATTGCAATTATTTGCCTCAAAAATTGTTAACCATTCCCACAAACCAACAGTTTCAATGTGTTCTACAGAAGTAGTACAATCTCCCGAGCCAGGCACTGGTACCAAGTACAAGGTTCTACTATGTGACCTATTTCGTAAATTGGAGCGCACCGGTCATCATTTCATTTGTTGCATAAGACCAAACAGGAATCAAGTTTGTGGCGTATTTGAGGAGGATCTCGTCTTACAGCAGCTTAGATACTGTGGAATTTTGGAGGTTGTCAGAATTTCAAGATCTGGTTATCCTACCAGAATGATGCATCAAGAATTTGCTGAAAGGTTCGGATTCTTCCTTAAAAAAGCTGGTGTATCCCGAGATCCGTTGAGTATATCAATGGCTGTTTTGCAACGATTTAACGTCCACCCCCATATGTACCATGTTGGTTATACCAAGCTATTTTTCCGAGCTGGGCAGATTAGGGCATTGGAGGAAAGGAGGAAGGAAGTTGTACAAGGCGTCCTAGCGGTTCAAAAGTACTTTCGTGGTTGCCGTTCCCGTGGCCACTTCCTTCAACTTAAGCAAGCAGCAACTACCTTACAATCACTTATTCGTGGCGAAAATGCCAGAAGGAGATGTACCGTTAATGTGCCGAGGTTCTCATTCGTTGTTTATGCTTCCGGTGTTCCTAAGAAAGTTTACGAGCTGCAAGCAGTCATACGAATACAATCGGCTATACGTGGATCGTTGACTCGAAAGCATTACAAGAGCATACTGAGCTCTTTTCGAGAAAACAGAATGTCTAAACTGAACGCAGACAGGAGAGCTTCAGAGGACAAACTTCAAGAACAGGTTGAATCCCTAACCACAACTGTGGGTGAGCTTCAAAAGAGGGTTGTGATGGCAGAAGCAGCCATGGAGAAAAAGGAAGAGGAAAATGCTGCACTGAGGGAGAAAGTAAAGCAATTTGAGTGTATGCGGTCAGAATATGATGCCAAGATGAAATCCATGGAGGATATGTGGCAAAAGCAGACGGCTTCTTTGCAAATGAGTCTTGCTGTTGCTAAAAGGACTCTTGCTGCTGCTGAAAATGTAGCCTGTCCGCTCGGAAGAGTTGATGTTGCTAATTCACCGCCTCACTATTACGATTCTGAGGATATGACGTCGATGGGATCTCGAACTCCCGGTGGTACCACGCCTGTAAAAGCCTTTGGAATCTCTGAGGTTGGAGCAGGGCGAGAAATGAACGGTGCTTTATTTGCAGTGAGCACTCTTGTAAGGGAATTTGAACAGAGAAGAATCGCATTTGATAACGATGCGAAAGCTTTAATTGAATCGAAATCAAGTCATGCACAAACACGGTCTAATATGAATCCAGAAGAAGAATACCGTAAAATTAAAGTCCGATTTGAAGCATGGAAGAAAGAGTACAAGGTAAGATTACGGGAAATGAAAGGAAAGGTTCATAAATACGGTCATTTTGAGGTCGATAAACTTCGTCGAAAATGGTGGGGGAAGTTGAGCTCAAGATCATCATCATAG 3576 43.48 MMLSASPSTIVRSSLEEMLDSLRRRDEIEIPKDLPPALPSRPTSKARIPPLRRALPVNFKVNGDGSSECCVNGFNGREDPLRKENGLANFALRRVKRDQGDESPYLVASEKDNEDQVNGPYGSSPEGSNWEEIISYFLHKKLRVWCQIPSGQWELGTIQSNSGAEASVMLSNNKVINVSTVDLLPTNPDIVEGVDDLVQLGYLNEPSVVNSLQQRFSRDEIYCNAGSVLIAVNPLKDTMKYGDGLITAYRERVMNDPHVYAVADAAYSGMMQDEVNQSIIISGESGAGKTETAKAALQYLTALGGGSGIVDRIPRANVILEAFGNAKTSRNNNASRFGKLIEILFSRTGKICGASRVVQLVNGERSFHVFYQLCAGAPSTLKEKLNLRMASEYSYLNHSECLVIGGVDDAQKFHVLVEALDMLQFTKEDQEHAFRLLAAVLWIGNITFQTINSENHVEVVMANEAVANAAELMGCSPNELKLVLSTPTCNRTLRQATDARDALAKFIYASLFDWLVEQINNSLKPRREQSGRSINILDFYGFESLKKNGFEQFCINYANERLQQHFIRHLFKLQQEDYEFNGVDGTKLNFKDNQECLNLIEKKPIGVLALLDEELSFPKATDLTFANKLKQHFKSHSCFKGERGRAFGVRHYAGEVVYDTNGFLEKNRDMLHSDSIQLFSSCSCKLLQLFASKIVNHSHKPTVSMCSTEVVQSPEPGTGTKYKVLLCDLFRKLERTGHHFICCIRPNRNQVCGVFEEDLVLQQLRYCGILEVVRISRSGYPTRMMHQEFAERFGFFLKKAGVSRDPLSISMAVLQRFNVHPHMYHVGYTKLFFRAGQIRALEERRKEVVQGVLAVQKYFRGCRSRGHFLQLKQAATTLQSLIRGENARRRCTVNVPRFSFVVYASGVPKKVYELQAVIRIQSAIRGSLTRKHYKSILSSFRENRMSKLNADRRASEDKLQEQVESLTTTVGELQKRVVMAEAAMEKKEEENAALREKVKQFECMRSEYDAKMKSMEDMWQKQTASLQMSLAVAKRTLAAAENVACPLGRVDVANSPPHYYDSEDMTSMGSRTPGGTTPVKAFGISEVGAGREMNGALFAVSTLVREFEQRRIAFDNDAKALIESKSSHAQTRSNMNPEEEYRKIKVRFEAWKKEYKVRLREMKGKVHKYGHFEVDKLRRKWWGKLSSRSSS 1191
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 4925737 4933303 + Carg12767-RA Car09g00813 154550
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car09g00813 1191 ProSiteProfiles Myosin N-terminal SH3-like domain profile. 139 188 IPR004009 GO:0003774|GO:0005524|GO:0016459
Car09g00813 1191 MobiDBLite consensus disorder prediction 101 126 - -
Car09g00813 1191 ProSiteProfiles Myosin motor domain profile. 192 846 IPR001609 GO:0003774|GO:0005524|GO:0016459
Car09g00813 1191 Pfam Myosin head (motor domain) 194 834 IPR001609 GO:0003774|GO:0005524|GO:0016459
Car09g00813 1191 ProSiteProfiles IQ motif profile. 913 942 IPR000048 GO:0005515
Car09g00813 1191 MobiDBLite consensus disorder prediction 27 46 - -
Car09g00813 1191 Pfam IQ calmodulin-binding motif 873 891 IPR000048 GO:0005515
Car09g00813 1191 Pfam IQ calmodulin-binding motif 915 934 IPR000048 GO:0005515
Car09g00813 1191 ProSiteProfiles IQ motif profile. 871 899 IPR000048 GO:0005515
Car09g00813 1191 Coils Coil 956 1004 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car04g01353 Car-Chr4:7834978 Car09g00813 Car-Chr9:4925737 0 dispersed
Car09g00813 Car-Chr9:4925737 Car18g00742 Car-Chr18:8498004 0 dispersed
Car16g00591 Car-Chr16:3709758 Car09g00813 Car-Chr9:4925737 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car09g00813 K10357 - csv:101210624 1873.6