Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Car09g00824 ATGGCAAATCCTCCTCCAAAATCCTTCATAAAGGCGGCAACTCTGTTTCTGTCTCTGTTTCTCTTCTCTCCGCCGTCTGTGGCTGTTGATTTCTTAACAGCCTCACAAAACCTCACCGGCGCCGCCACTCTGGTGTCGGAGAAAGGGTTTTTCGAACTGGGTTTCTTCAGCCCTAGAAATTCCACGAATGTTTACTTGGGAATTTGGTATAAAATCATCCCAATACGTACGATCGTTTGGGTTGCGAACAGAGAAAACCCCATTGTTGATTCTTCCGCTGCTGTTCTTAAAATCAACACTACAACGAATGTTCTTGTTCTCTTGCAGGATAACGCCGTTGTTTGGCTTGCAAATACGTCGAAATCGGTAGAGATTCCGAAACTCCAGCTCTTGGACAATGGAAATCTGGTGTTGAAGGACGCTAAATCGGAGGTAATTTCATGGCAGAGCTTCGATTATCCAACGGATACATTACTACCCGGAATGAAGCTTGGATGGGACTTCGAAAATGGAATCCAACGCCGGTTATCAGCATGGAAAAGCTCCGATGACCCATCTCCGGGGAGTTTAACCATGGAAATGATGAACACAAACTACCCAGAACCGGCGATGTGGAATGGCTCGAAAGAGTTCATGAGGAGTGGACCATGGAACGGTCTTCAATTCAGCGCAAAACCCACCTCGGCCTTGCCGATTTTGGTCTACAGCTACGTAAACAACAAATCCGAGCTCTCTTACAGCTATGAACTCATAAACTCCTCATTAATCGGAAGAATGGTGCTGAATCAGACGCTGACGAGAAGAGAGGCATGGATATGGTCGGATTCTGAGAAGAATTGGAAGCTATATGCAACTATGCCGAGGGATTACTGCGACACCTACGGGCTTTGTGGAGCGTTTGGGAGCTGCAACATTGAGCTAACACCAGCTTGTCAATGTCTACAAGGGTTTCATCCAAAAGTGCCTGAGAAGTGGAATTTGATGGATTATGCTGATGGGTGTGTAAGAAATAAGCCTTTGAATTGTTCTTCTACTGATAAACTTGGGTTTGCGCAGATTCCTGGGCTGAAATTGCCTGATACTCAGCTAACTTGGGTTAATGAAAGCATGAGCTTAAACGAGTGTAGAGACAAGTGTTTGAGGAACTGTTCTTGTGTGGCATTTGCCAATACTGATATCAGGGGCTCAGGGAGTGGCTGCGCTATTTGGCTTGGGGATCTTATTGATATCAAAGTGGTTCGAAGAGGGGGCCAGGATTTGTATGTTAGGATGTTGGCATCTGAATTGGAGACGAAGAAGAAGACGAGCTCGGTTGTCGTCGGCGTTATCATCGGAGCGACCGTTCTGGTGATTGCTGGTCTGGTTTTGATTGGGTTTTACATCATTAGAAGCAAGAGGAGAAGCCTTGAAGGAATGGGCAAGGATCTTGGACAGCAAGAAGACTTGGAGCTTCCATTCTTGGACTTGGCAACTATATCCAATGCCACAGACAATTTTGCAAGCTACAATAAGCTTGGAGAAGGTGGCTTCGGTGCAGTTTTTCGGGGTAGGCTTGCAGATGGACAAGAAATTGCAGTAAAGAGACTTTCTAGCTATTCGAGACAAGGAACCGAAGAATTTAAGAACGAAGTGATACTCATTGCCAAACTTCAACATCGAAATCTCGTAAAACTTCTCGGTTGTTGCATCGAAGGGGACGAAAAGATGTTGATTTACGAGTACATGCCCAATAATAGTTTGGACTCCTTCATATTTGATAACGATAGAAAGAAGCTTTTAGATTGGTCGAAAAGATTCAATATCATATGCGGAGTAGCTCGAGGGATTCTTTACCTTCATCAAGATTCGAGATTGAGGATTATACATAGAGATTTAAAAGCAAGTAATGTCTTGCTCGATATCGATATGAATCCGAAAATCTCGGATTTTGGAATGGCTAGAACGTTTGGAGGGGATCAAACCGAAGGAAATACTCGGAGAGTGGTCGGAACTGGGTATATGGCACCAGAATACGCCATTGACGGACAGTTTTCTATCAAATCAGATGTCTTTAGTTTTGGGATTTTATTGTTGGAAATCGTAAGTGGAAAGAAGAACCGAGGAATTTTCCGCCCTAACCAAGCTCTCAACCTTATTGGACACGCATGGAAGTTGTGGAACGAAGGAAAACCATTAGAGTTGGTCGACGCAAGCATGGGAGAATCTTATGCTCTATCTGAAGTGTTACGATGCATTCATGTTAGTCTTTTGTGCTTGCAACAGCATCCCGAGGATAGACCGACCATGTCGAATGTGGTATTAATGCTAAGTAGTGAGAGTACCTTGGCACAACCGAAACAACCGGGATTTTACATGGAAACGGGTCCTTGTCCACCCCCTTTAGGGCTTAGCGTCCTTATTGACACACCACCCGATATCCACCTCCTTTGGGGCTCAACGTCTTTGCTGGCACACCGCCCGCTTATCGTATGGGAATTCTCCGGAGATTTACGCTCAGCGGCTGCCGGCGACGATGAGAACGTCGGAATAAACGCACCATGCGTCCATGTCCATAGAGGTTCAGTCCTACTTATTTCTCAGAGATTTAAACTGAACGTCCTGATCTCCGATCCAGGGAGCATTATTTTGGGGGCGCGAAGTGCAGGTCTAGTTTCTGGATGA 2661 45.32 MANPPPKSFIKAATLFLSLFLFSPPSVAVDFLTASQNLTGAATLVSEKGFFELGFFSPRNSTNVYLGIWYKIIPIRTIVWVANRENPIVDSSAAVLKINTTTNVLVLLQDNAVVWLANTSKSVEIPKLQLLDNGNLVLKDAKSEVISWQSFDYPTDTLLPGMKLGWDFENGIQRRLSAWKSSDDPSPGSLTMEMMNTNYPEPAMWNGSKEFMRSGPWNGLQFSAKPTSALPILVYSYVNNKSELSYSYELINSSLIGRMVLNQTLTRREAWIWSDSEKNWKLYATMPRDYCDTYGLCGAFGSCNIELTPACQCLQGFHPKVPEKWNLMDYADGCVRNKPLNCSSTDKLGFAQIPGLKLPDTQLTWVNESMSLNECRDKCLRNCSCVAFANTDIRGSGSGCAIWLGDLIDIKVVRRGGQDLYVRMLASELETKKKTSSVVVGVIIGATVLVIAGLVLIGFYIIRSKRRSLEGMGKDLGQQEDLELPFLDLATISNATDNFASYNKLGEGGFGAVFRGRLADGQEIAVKRLSSYSRQGTEEFKNEVILIAKLQHRNLVKLLGCCIEGDEKMLIYEYMPNNSLDSFIFDNDRKKLLDWSKRFNIICGVARGILYLHQDSRLRIIHRDLKASNVLLDIDMNPKISDFGMARTFGGDQTEGNTRRVVGTGYMAPEYAIDGQFSIKSDVFSFGILLLEIVSGKKNRGIFRPNQALNLIGHAWKLWNEGKPLELVDASMGESYALSEVLRCIHVSLLCLQQHPEDRPTMSNVVLMLSSESTLAQPKQPGFYMETGPCPPPLGLSVLIDTPPDIHLLWGSTSLLAHRPLIVWEFSGDLRSAAAGDDENVGINAPCVHVHRGSVLLISQRFKLNVLISDPGSIILGARSAGLVSG 886
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
9 5016207 5021625 + Carg12778-RA Car09g00824 154561
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Car09g00824 886 Pfam PAN-like domain 346 410 IPR003609 -
Car09g00824 886 ProSiteProfiles Bulb-type lectin domain profile. 29 151 IPR001480 -
Car09g00824 886 Pfam D-mannose binding lectin 77 180 IPR001480 -
Car09g00824 886 Pfam Protein tyrosine and serine/threonine kinase 502 767 IPR001245 GO:0004672|GO:0006468
Car09g00824 886 ProSiteProfiles PAN/Apple domain profile. 342 425 IPR003609 -
Car09g00824 886 ProSitePatterns Serine/Threonine protein kinases active-site signature. 620 632 IPR008271 GO:0004672|GO:0006468
Car09g00824 886 ProSitePatterns Protein kinases ATP-binding region signature. 505 527 IPR017441 GO:0005524
Car09g00824 886 Pfam S-locus glycoprotein domain 213 320 IPR000858 GO:0048544
Car09g00824 886 ProSiteProfiles Protein kinase domain profile. 499 775 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car03g00466 Car-Chr3:4999507 Car09g00824 Car-Chr9:5016207 3.02E-129 dispersed
Car04g00948 Car-Chr4:5460460 Car09g00824 Car-Chr9:5016207 4.13E-98 dispersed
Car09g00824 Car-Chr9:5016207 Car18g00312 Car-Chr18:1872334 0 dispersed
Car13g00573 Car-Chr13:7595403 Car09g00824 Car-Chr9:5016207 2.16E-101 dispersed
Car08g00553 Car-Chr8:3462995 Car09g00824 Car-Chr9:5016207 2.55E-150 transposed
Car13g00855 Car-Chr13:9121046 Car09g00824 Car-Chr9:5016207 3.84E-101 transposed
Car13g00563 Car-Chr13:7513416 Car09g00824 Car-Chr9:5016207 5.13E-82 wgd
Car16g00582 Car-Chr16:3649898 Car09g00824 Car-Chr9:5016207 0 wgd
Car18g00311 Car-Chr18:1868504 Car09g00824 Car-Chr9:5016207 1.34E-42 wgd
Car03g00451 Car-Chr3:4958316 Car09g00824 Car-Chr9:5016207 1.29E-32 wgd
Car07g00242 Car-Chr7:1321089 Car09g00824 Car-Chr9:5016207 0 wgd
       

Transcription factors information


Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
89099 PF07714 PK_Tyr_Ser-Thr 1.00E-49 CL0016 Car PK
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car09g00824 - - csv:101216184 1317.75