Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car09g00833 ATGGATTCTCACCAGCTGTTTGGATTTGGGGTTAATAGTGCAGAATTTTCATATACATCTTCTTATTCCTCTGTTCCATCTTTACCTAATAGTTTGCTTGGACCTGTGAACTTCAACTTAAGAAATTCCCCGGTGTCGTCGTCGTTATTTTCGTCGCAATTCGAATCGGATTCCTTTACGACGACGACTGTAAGTGATAGCCAGGATCAAAGGAATTCCCCGGATGATCTCTCGGGACTTAGCCCTTCGTGTAATTCGTCGTTCGAAACGAGTAGCTTTAATCGAATAGCTTCGTCGTATTTGGGATCAAATGCATTTGTTTATGAGGGTTGTTCTACTGAGAATATAAGCTATGCTTTGAAACAATTGGAGAGTGCTTTGATGGAACCTGATAATGAGGAAGTTGTGAACAAGCCTGATGAGAGTAGCAGGCCACAGATGATGGGGCAGAGACCATACTCGTGGAGCCAAGATCGATGTGGTGGGTCGTCGTATGTTGTTCAGTCTCAGACGTCGCCTGTGTCGAGAAGCCAGCGTTCTGAAGAAGTTCGATTGGGGAAACGCCAGAAATCGATGGATGAACCAATGTCGCAGCAGGATGGATTGCCATCGGATAATCTTAAGGAGTTGCTGATTGCTTGTGCAAAAGCTTTAGCTGAGTACAGGATGGAGGATTTCGACAAATTGGTTACTGCAGCACGAGGTGCTGTGTCTATTGGCGGTGAACCGATCCAACGTCTCGGCGCTTACATGGTCGAAGGACTGGTGGCAAGGAAAGAGGACTCGGGGGCGAATATATACCGTGCTCTAAACTGTAGAGAGCCTGCAAGTGATGATTTGCTTTCTTATATGCATATGCTATATGAAATCTGCCCCTACTTGAAGTTCGGTTACATGGCAGCAAACGGGGCGATCGCCGAAGCCTGTCGAAACGAAGATCGCATTCACATTATAGACTTCCAGATTAGTCAAGGGACACAATGGTTAACTCTTCTTCAAGCACTTGCAGCTAGACCGAGTGGAGCTCCACATGTGAGGATAACTGGTATCGACGACCCTGTTTCTAAATATGCTCGTGGTGATGGGTTGGAGGTCGTAGAGAGTAGGTTAGCCGAGATCTCGAGAAAGTACGGAATAAAGGTAGAGTTTCATGGAATACCTGTTTTCGCTCCAAACATCACGCGTGATATGCTCGACATCAGACCGGGGGAGGCTCTAGCTGTAAACTTCCCGTTGCAGCTTCATCATACCCCGGACGAAAGTGTCGACGTGAACAATCCACGCGACGGGCTGCTAAGGCTGGTGAAGTCATTATCCCCAAAGGTTGTAACTTTGGTAGAGCAAGAATCAAACACCAACACAACCCCTTTCTTCAACAGGTTTGTGGAAACATTAGATTACTACTTAGCAATCTTTGAGTCCATTGATGTCACTCTACCAAGAGACAACAAGAAGCGTATCAACGTCGAGCAGCATTGTTTAGCAAAAGATATCGTTAACGTCATTGCTTGCGAGGGGAGGGAACGAGAAGAGCGACACGAGCTCTTCGGTAAGTGGAAATCAAGGTTGACAATGGCAGGGTTTCGCCAGTTCCCGTTGAGCTCTTATGTCAACTCCGTCATTAGAAGTCTTCTCAGGTGTTATTCGGAGCATTACACGCTCGTCGAAAAGGATGGAGCGATGCTGTTGGGATGGAAAAACAGGAACCTGATATCGGCCTCGGCATGGAATTGA 1734 46.6 MDSHQLFGFGVNSAEFSYTSSYSSVPSLPNSLLGPVNFNLRNSPVSSSLFSSQFESDSFTTTTVSDSQDQRNSPDDLSGLSPSCNSSFETSSFNRIASSYLGSNAFVYEGCSTENISYALKQLESALMEPDNEEVVNKPDESSRPQMMGQRPYSWSQDRCGGSSYVVQSQTSPVSRSQRSEEVRLGKRQKSMDEPMSQQDGLPSDNLKELLIACAKALAEYRMEDFDKLVTAARGAVSIGGEPIQRLGAYMVEGLVARKEDSGANIYRALNCREPASDDLLSYMHMLYEICPYLKFGYMAANGAIAEACRNEDRIHIIDFQISQGTQWLTLLQALAARPSGAPHVRITGIDDPVSKYARGDGLEVVESRLAEISRKYGIKVEFHGIPVFAPNITRDMLDIRPGEALAVNFPLQLHHTPDESVDVNNPRDGLLRLVKSLSPKVVTLVEQESNTNTTPFFNRFVETLDYYLAIFESIDVTLPRDNKKRINVEQHCLAKDIVNVIACEGREREERHELFGKWKSRLTMAGFRQFPLSSYVNSVIRSLLRCYSEHYTLVEKDGAMLLGWKNRNLISASAWN 577
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 5076543 5078276 - Carg12787-RA Car09g00833 154570
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car09g00833 577 MobiDBLite consensus disorder prediction 143 179 - -
Car09g00833 577 MobiDBLite consensus disorder prediction 180 194 - -
Car09g00833 577 MobiDBLite consensus disorder prediction 130 203 - -
Car09g00833 577 ProSiteProfiles GRAS family profile. 198 577 IPR005202 -
Car09g00833 577 Pfam GRAS domain family 207 576 IPR005202 -
Car09g00833 577 MobiDBLite consensus disorder prediction 61 81 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car09g00833 Car16g00572 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car09g00833 Car-Chr9:5076543 Car16g00908 Car-Chr16:7434890 1.63E-172 dispersed
Car16g00572 Car-Chr16:3613089 Car09g00833 Car-Chr9:5076543 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
4093 PF03514 GRAS 6.90E-127 CL0063 Car TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car09g00833 - - csv:101216606 961.829