Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car09g00835 ATGCCAAAAGTTTGGTTCTCTCTGAAAAAGTCCTTCCCCTGCAAACCAGAGCCATCAGAAGTGTATGATCCTAAGTGCAGGAAACAACTCAACACAACCACAACAAAGAAAGCAGCCAAAAAGACAGGCTGTTCTTCAGGAAGGTCTGGCTGTTCAAGGTCCATAGCAAATCTCAAAGACGTCATCCATGGAAGCAAGAGGCACATCGAAAACCCGCCAATTTGCAGCCCGAGGTCGATCGGTAGCAGCGAGTTCCTCAACCCGATTGCTCATGAAGTAATACTAAGCAACTCAAAGTGTGAGCTCAAGATCACTGGTTTTGGAAGCTTCCACCAAGAGGGTGGGGGAAATTCTGATCTTAGCAGGGGTGGAGGCGGGAATTCGCCATTTTTCGGTACACTAAGGCCCGGAACTCCCGGTCCGGGGTCCAACTCCCCTTCTAGTACTACCTCCATATCTGCAACAAGAAAGCTTCCTTCTCTTTTGTCCTATAGAGATGGGAGTACTGCTAAATCCAAGGGAGGTGGGGAAGTTCGTACGAGAAAACGGTTCATGCCGCTAACTGAATCGAACGGTAGGACGTTTTCGATGGTTACTTGCCATAAATGTGGAGAGCAGTTCTGCAAATTGGAGGCTGCTGAGTCTCACCATCTCTCCAAGCATGCCGTTACCGAGCTTGTGGAGGGCGATTCATCAAGGAAGATTGTCGAAATAATATGTCGAACAAACTTGTCGAAGTCGGAGAACAACAATAACCGAATCGAACGAGTTTTCAAAGTTCACAATATGCAAAAAGCATTGGCAGGATTTGAAGAACACAGGGAAATGGTGAAGATCAAGGCAAGCAAGCTTTCAAAGAAACACCCTCGATGCCTCGCGGATGGGAACGAGCTGCTGAGGTTTTACGGGACGACGTTAGCCTGCACTCTTGGATTAAACGGCTCATCCACCCTCTGCATATCACAGAAATGCAGTGTCTGCAGAATTATAAGGAATGGTTTCTCAGCAGAGAAGGATATGAATGAAGAAGTGGGAGTTTTCACGACTTCAACGAGCGGGAAAGCTTACGAAACCATTGAAACAACCGAAGAAACCTCGGTGAAGAAAGCATTGATAATCTGCAGAGTGATTGCAGGGAGGGTTCATAGGCCATTGGAGAACATCAAAGATATGGTTGGCCAAGCAGGGTTTGACTCCTTGGCTGGCAAAGTGGGCTTACATTCCACCATTGAAGAGCTTTACTTGCTCAATCCTAAAGCTTTGCTTCCTTGTTTTGTTGTGATTTGCAAACCATGA 1296 46.76 MPKVWFSLKKSFPCKPEPSEVYDPKCRKQLNTTTTKKAAKKTGCSSGRSGCSRSIANLKDVIHGSKRHIENPPICSPRSIGSSEFLNPIAHEVILSNSKCELKITGFGSFHQEGGGNSDLSRGGGGNSPFFGTLRPGTPGPGSNSPSSTTSISATRKLPSLLSYRDGSTAKSKGGGEVRTRKRFMPLTESNGRTFSMVTCHKCGEQFCKLEAAESHHLSKHAVTELVEGDSSRKIVEIICRTNLSKSENNNNRIERVFKVHNMQKALAGFEEHREMVKIKASKLSKKHPRCLADGNELLRFYGTTLACTLGLNGSSTLCISQKCSVCRIIRNGFSAEKDMNEEVGVFTTSTSGKAYETIETTEETSVKKALIICRVIAGRVHRPLENIKDMVGQAGFDSLAGKVGLHSTIEELYLLNPKALLPCFVVICKP 431
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 5096028 5097651 - Carg12789-RA Car09g00835 154572
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car09g00835 431 MobiDBLite consensus disorder prediction 114 156 - -
Car09g00835 431 ProSitePatterns Zinc finger C2H2 type domain signature. 200 221 IPR013087 -
Car09g00835 431 MobiDBLite consensus disorder prediction 138 156 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car04g00864 Car09g00835 CCT
Car09g00835 Car16g00569 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car03g00459 Car-Chr3:4984494 Car09g00835 Car-Chr9:5096028 1.01E-38 dispersed
Car09g00835 Car-Chr9:5096028 Car16g00829 Car-Chr16:5472356 1.42E-174 dispersed
Car16g00569 Car-Chr16:3597167 Car09g00835 Car-Chr9:5096028 0 wgd
Car03g00458 Car-Chr3:4984175 Car09g00835 Car-Chr9:5096028 6.52E-15 wgd
Car04g00864 Car-Chr4:4978981 Car09g00835 Car-Chr9:5096028 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car09g00835 - - csv:101213316 715.687