Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Car09g00852 | ATGGGTGCCATGATATCAAACTTGGCATTTGTATTCCGTAACATATTTTCGAAGAAGGGCATGAAGGGAAAATCTGTTAGCGGGATGAACTACTATGCGTGTTTATCGATTTTGTCTTTGTTACTCTTGACGCCATTTGCGTTTGCCGTGGAGGGACCGCAACTGTGGGCAGAGGGATGGAAAACAGCAATCTCTCAAATCGGACCTCATTTCGTTTGCGTCGGAAACACCATGAAACGTATATCCGTCATAGTTTCTTCCATCATCATCTTCCGCACGCCCGTGCAGCCAGTCAACGCACTCGGAGCAGCCATTGCAGTTCTCGGAACCTTCATATACTCGCAGGTGCGCCTTTGCTCCTAG | 363 | 47.93 | MGAMISNLAFVFRNIFSKKGMKGKSVSGMNYYACLSILSLLLLTPFAFAVEGPQLWAEGWKTAISQIGPHFVCVGNTMKRISVIVSSIIIFRTPVQPVNALGAAIAVLGTFIYSQVRLCS | 120 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 9 | 5211866 | 5212686 | + | Carg12806-RA | Car09g00852 | 154589 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Car09g00852 | 120 | Pfam | Triose-phosphate Transporter family | 64 | 114 | IPR004853 | - | |
| Car09g00852 | 120 | Pfam | Triose-phosphate Transporter family | 1 | 59 | IPR004853 | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Car09g00852 | Car-Chr9:5211866 | Car16g00851 | Car-Chr16:6217793 | 9.98E-51 | dispersed | |
| Car09g00852 | Car-Chr9:5211866 | Car16g00554 | Car-Chr16:3501529 | 1.68E-55 | transposed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Car09g00852 | K15283 | - | csv:101220046 | 177.563 |