Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car09g00869 ATGTTCTCATTCCTCTCATCGTTCTTCCTTCCTTGTTCCTTTGATCTCTTTCGCGCGTTCTTGGTCTTTAGCTTTCTGATCCCATCTGCTTTCGATCCATTCGCCGACGCCAAGGATTCTGATGCCCCCGGAACTAAAGCTTATGTTCATATCCGCGTTCAGCAGAGGAATGGCAAAAAGTGCTTGACTACAGTTCAGGGTCTGAAGAAAGAGTTCAGCTACGAGAAGATCCTTAAGGACGTGAAGAAGGAATTCTGCTGTAATGGTAACGTTGTTCAAGACAAAGAATTGGGGAAGATAATCCAACTTCAAGGCGATCAACGCAAAAACGTGTCTCAGTTCCTTGTCCAGGCTGGTCTCGTTAAGAAGGATCAGATCAAAATTCATGGGTTTTGA 396 44.7 MFSFLSSFFLPCSFDLFRAFLVFSFLIPSAFDPFADAKDSDAPGTKAYVHIRVQQRNGKKCLTTVQGLKKEFSYEKILKDVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKDQIKIHGF 131
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 5316227 5317286 - Carg12823-RA Car09g00869 154606
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car09g00869 131 Pfam Translation initiation factor SUI1 46 119 IPR001950 GO:0003743|GO:0006413
Car09g00869 131 ProSiteProfiles Translation initiation factor SUI1 family profile. 49 119 IPR001950 GO:0003743|GO:0006413
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car09g00869 Car16g00540 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car09g00869 Car-Chr9:5316227 Car11g01523 Car-Chr11:12255877 7.56E-59 dispersed
Car16g00540 Car-Chr16:3428428 Car09g00869 Car-Chr9:5316227 6.16E-70 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car09g00869 K03113 - csv:101202908 214.542