Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car09g00891 ATGAGTTGCTGGAAGAAATTTCCGGCGATGTGTTCTTCTTCTCGTACTTTCCTTCTTCTGTTTCCTCTGTTTCTTCACTCGTTCGTCGCGCTGGTATCTGCTCAGGGATCTAATAACACTTCTCCATGGCAGACTTTGAGTGGAGATCCTCCATTTGTTGTGGCTCGTGGTGGGTTTTCAGGGTTGTTTCCTGATTCGAGTGGATTTGCCTATAGTTTTGCAGTTATGGTTAGTGTTCCTGATGTGATCTTATGGTGCGATGTGCAATTAACTAAAGATGGAGTTGGAATTTGTCTCCCGGATCTGAGTTTTAACAATGCTACTGACGCTAAGGGGATTTTGGGGGAAAACCGCAGCAGTGTGTATCTTGTTAATGGAGTAGCTACTAAGGGATTGTTTACGGTCGATTTCAATGCGGAAGAACTGGCAAATGTTTCTCTTACTCAAGGTATCTTTTCTCGGACGAACAAGTTTGATGGCAATCGGTTTGTTATTCTCACTCCTGAAGATGTGGTTAACCAGTTCAAGCCACCAGGATTTTGGCTGAATGTTCAGCATGATGCATTCTTCACACAACGAAACTTGAGCATGAGGAACTTTGTACTTTCTGTATCCAGACGCATCATTGTTAACTACATATCATCACCAGAAGTGGGATTTCTTAGAAGCATTGCATCGAGATTTAATCCCCGCACAACGAAGTTGATCCTTCGGGTTTTACAACCAACTGATATTGAGATTACCACCAATCAGACATATCAATCTCTCTTACGCAATCTCACCTTTATCAAGACATTTGCTTCTGGAATTCTTGTTCCTAAGACTTATATAATGCCCATTAAGGATGGTTACATACAATCTGAAACCTCTCTCGTTTCTGACGCTCATAAAGCAAATCTGGAAATTTTTGCATCAGAGTTCTATAGTGACCTTCCACTAAGCTACAACTACAGTTATGATCCTGTTACTGAATACCTGTCTTACATTGACAACGGTAAATTTTCAGTTGATGGTGTGCTCACTGATTTCCCTATCAGTCCATCGTCAGCTATTGACTGTTTTGCTCATTTGGACAAGAATGCCAAAAGTCAAGCCAAACCTTTGGTTATTTCAAAATTTGGAGCTAGTGGAGACTTTCCTGGTTGCACAAATTTGGCGTATTCCAAGGCTATTTCTGATGGCGTTGATGTGCTTGACTGTCCAGTTCAAATGTCAAAAGACGGAATACCATTTTGCATGAGCTCAATTAATCTCATCGAGAGCACAACAATATCTCAAACATCATTCACTACTCTTTCTAAAAAAGTTCCTGAAATTAGTCCTAACGATGGAATCTTTGCTTTTGACTTAACATGGGAAGAGATTCACGGCCTGACCCCGTCAATATTGAGCCCTTCATCGAAGTTCACGTTGTTCCGAAACCCAAAGTTCCGAAACAAGGGGGAATTCTTAACGCTACCTGATTTCTTGGACTTGGCAAAGAATTCCAGCACTCTTTCTGGTGTCTTGATCCATATTGAGAATGCAGCCTACCTTGCTAAGGAGCAGGGTTTAGGTGTAATTGATGCGGTCATTGATTCCTTGAGCAAAGCTGGTTATGATAATCAGACAGCACAGAAAGTATTGATTCAATCTCCAAATAGCCCTGTTCTAATCAAATTTAAACAGGAAAAGAAAGAATACGAGCTTGTTTACAAAGTCGACGAGTCGATTAGTGATGTGCTCAATTCTACTGTTGTGGACATTAAGAGTTTTGCCAACTCTGTGACTGTCAGCAAGACCTCTGTCTTACCTGTAAATCAGCAATTTCTCATTGGACCTACAGATGTTGTGACGAAGCTGCAATCACTTAATATCTCTGTATATGTGGAAACCTTCAGCAATGAATTTGTCTCTCAAGCATGGGATTTCTTCTCAGATGCAACAGTAGAGATCAACTCATTTGTTATGGGATCCGGCATTGATGGAGTCATCACCGACTTTCCAAAGACATCTGCTAGATATAAAAAGAACCGTTGTTTAACAATGAAAGAAGCACCAAATTACATGAGCCCTGTCCAGCCTGGTAGCTTGATGCAGCTTATTACTGCAGACTACCTGCCTCCAAAGGAACGTCCAAGCCCGATTCTAGACGACAATGACGTAGCCGAGCCACCATTGCCTCCGGTTTCGAAGAAAGCCCCAGGACCTGCTGTGGATGATGGCTCTACAGCAACACCTCCAACATCTAAACCCAATGGACAACCCAAGCTTGGAGCTGGAACAGGCTTCTTGCTTATGAACCTTGCCATACTCTGCCTTTCTCTTCTTCCATTCTGA 2319 42.09 MSCWKKFPAMCSSSRTFLLLFPLFLHSFVALVSAQGSNNTSPWQTLSGDPPFVVARGGFSGLFPDSSGFAYSFAVMVSVPDVILWCDVQLTKDGVGICLPDLSFNNATDAKGILGENRSSVYLVNGVATKGLFTVDFNAEELANVSLTQGIFSRTNKFDGNRFVILTPEDVVNQFKPPGFWLNVQHDAFFTQRNLSMRNFVLSVSRRIIVNYISSPEVGFLRSIASRFNPRTTKLILRVLQPTDIEITTNQTYQSLLRNLTFIKTFASGILVPKTYIMPIKDGYIQSETSLVSDAHKANLEIFASEFYSDLPLSYNYSYDPVTEYLSYIDNGKFSVDGVLTDFPISPSSAIDCFAHLDKNAKSQAKPLVISKFGASGDFPGCTNLAYSKAISDGVDVLDCPVQMSKDGIPFCMSSINLIESTTISQTSFTTLSKKVPEISPNDGIFAFDLTWEEIHGLTPSILSPSSKFTLFRNPKFRNKGEFLTLPDFLDLAKNSSTLSGVLIHIENAAYLAKEQGLGVIDAVIDSLSKAGYDNQTAQKVLIQSPNSPVLIKFKQEKKEYELVYKVDESISDVLNSTVVDIKSFANSVTVSKTSVLPVNQQFLIGPTDVVTKLQSLNISVYVETFSNEFVSQAWDFFSDATVEINSFVMGSGIDGVITDFPKTSARYKKNRCLTMKEAPNYMSPVQPGSLMQLITADYLPPKERPSPILDDNDVAEPPLPPVSKKAPGPAVDDGSTATPPTSKPNGQPKLGAGTGFLLMNLAILCLSLLPF 772
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 5495693 5503266 + Carg12845-RA Car09g00891 154628
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car09g00891 772 Pfam Glycerophosphoryl diester phosphodiesterase family 86 344 IPR030395 GO:0006629|GO:0008081
Car09g00891 772 Pfam Glycerophosphoryl diester phosphodiesterase family 374 664 IPR030395 GO:0006629|GO:0008081
Car09g00891 772 MobiDBLite consensus disorder prediction 706 749 - -
Car09g00891 772 ProSiteProfiles GP-PDE domain profile. 367 669 IPR030395 GO:0006629|GO:0008081
Car09g00891 772 ProSiteProfiles GP-PDE domain profile. 51 351 IPR030395 GO:0006629|GO:0008081
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car01g00972 Car09g00891 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car03g00703 Car-Chr3:6134749 Car09g00891 Car-Chr9:5495693 1.92E-171 dispersed
Car07g00443 Car-Chr7:2250592 Car09g00891 Car-Chr9:5495693 2.65E-177 dispersed
Car13g00909 Car-Chr13:9413389 Car09g00891 Car-Chr9:5495693 2.98E-21 transposed
Car18g00003 Car-Chr18:9820 Car09g00891 Car-Chr9:5495693 4.79E-20 transposed
Car01g00972 Car-Chr1:9265160 Car09g00891 Car-Chr9:5495693 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car09g00891 - - bhj:120086180 1279.23