Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car09g00892 ATGCCTGAGAAATCGAGCCACAATGTTGTTTCAGAGCCTCGTTTGGTGGCTAGAAAGTTCCTGGCTAGGCCTCAGCATGAAGGGATGGGTGCCATTGTTCGAAGGAGCATTGGAAGTGTGACACATGAAGATTTTGAAGGCCACAAGGGAACAATAGGAGCAGGTGACTTGCAGTGGATGACTGCAGGTAGAGGTATTGTACATTCAGAAATGCCTGCAGCTCAAGCTTTTGTAACACTTCCTTTTATGAATCTCAGGATTGAACCAAACTACCAAGAAGTTTCAAGCAAGGAAATCCCAGAAGCTACCAAAGATGGAGTGCAAGTGAAAGTAATAGCCGGTGAAGCATTTGGAGCAAAGTCACCAATCTACACAAGAACACCAACCATGTATTTAGACATCACTCTCAAGCCAAAAGCTCATCTCCAGCAGCCGATCCCATCGTCCTGGAACGCGTTCGTTTACGTTCTTGAGGGCGAAGGCATCTTCGGCAGTTCGAAGGCGACGTCGACGACAGCACATAACCTTCTTCTGCTCGGGTTCGGGGACGGTTTAGAGGTGTGGAATAAGTCAGGCAAGGCTCTGAGGTTCATTTTGGTAGGAGGTGAACCATTGAGTGAGGCTGTTGTGCAATTTGGGCCATTTGTGATGAACACTCAAGAGGAAATTGACCAAACAATTGATGATTTTGATAATTATACCAATGGGTTTGAGAAAGCAAGGCATTGGAGATCAGAAGCTGCAATTTCTCTTGGGTTCTAA 762 46.06 MPEKSSHNVVSEPRLVARKFLARPQHEGMGAIVRRSIGSVTHEDFEGHKGTIGAGDLQWMTAGRGIVHSEMPAAQAFVTLPFMNLRIEPNYQEVSSKEIPEATKDGVQVKVIAGEAFGAKSPIYTRTPTMYLDITLKPKAHLQQPIPSSWNAFVYVLEGEGIFGSSKATSTTAHNLLLLGFGDGLEVWNKSGKALRFILVGGEPLSEAVVQFGPFVMNTQEEIDQTIDDFDNYTNGFEKARHWRSEAAISLGF 253
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 5505751 5512260 + Carg12846-RA Car09g00892 154629
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car09g00892 253 Pfam Pirin C-terminal cupin domain 131 235 IPR008778 -
Car09g00892 253 Pfam Pirin 22 75 IPR003829 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car09g00892 Car16g00901 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car09g00892 Car-Chr9:5505751 Car16g00901 Car-Chr16:7360881 2.89E-113 dispersed
Car09g00892 Car-Chr9:5505751 Car14g01335 Car-Chr14:11283177 4.09E-96 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car09g00892 K06911 - csv:101216351 430.254