Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car09g00963 ATGGCCACCACCGGAGACGCACGGCGGAATGAGTTTTCCATCTCCACGCTGCTGCTTCTCTCACTCTCCATCGTTGTCGTCGTCTTCCTCCTCCCTGTTTCCTCCGCCGGCGAAACCTCCTCCTTCTTTAACCACCGCAAGATGTCCGCCGTTGGAACTTCTTCCAACTCTACCTACGCCGTCATCTTCGACGCCGGAAGCTCCGGCAGCCGCGTCCATGTCTTCCACTTCGACCGGAACATGGATCTCCTCTTCATCGGTTCAGACATTGAGGTTTTCTCACAGATAAAGCCAGGGCTGAGTTCGTACGCTGATGATCCTCAGAAAGCCGCGGATTCTCTAATTCCTTTACTGGAGAAAGCAGAAATCGCAGTTCCTGAGAAACTTCAATCCGTGACGCCGATACGCCTCGGAGCGACGGCAGGGCTTCGGTTCTTGGAAGGCGACAGATCTGAGAGGATTTTGGAAGCGGTCAGGAATCTTCTGAAAACGAAGAGCGGATTCATGTACGGAGCGGATTCGGTTTCGATTTTGGACGGAAATCAAGAAGGTTCTTATCAATGGTTGACAGTAAACTATTTGCTGGAGAATTTGGGGAAGAGATACTCTAATACGGTGGGAGTAATTGACCTTGGAGGTGGCTCTGTTCAAATGGCGTATGCAATCTCTGATGAAGATGCAGCCAAGGCGCCCATTTCTTCTGATGGCTACTCCAAATTTGTTCAGAAATTTTACCTCAAGGGCGCTAATTATTACCTCTACGTTCACAGTTATTTGCGTTACGGTTTACAAGCTGCCCGAGTTGAGATCTTGAAGGTGACCGAAGAGCTTGGCAACCCCTGCATTTTAGCTGGCTATCAAGGTACATACGCATACGGTGGAAAGGAGTACAAAGCATCGTCACCTCGATCGGGGTCGAGCTTTGCCCGTTGCCGGAGTGTAATTCTGGAGGCACTGAATATCAACAAATCATGTGGGTATAACGATTGCAGCTTTGATGGTGTATGGAGTGGCGGCGGAGGAGCCGGCGTGAAGAACCTCTATGTTGCTTCCTTTTTCTTTGACAAAGCAGCTCAGGCGGGTTTCATTGATTCCGACAAGCCAGACGCCATTGTGAAGCCCATTGATTTCAAGAGAGCTGCGAGGATTGCTTGTCAAACCAAGTTTGTTGATGCAAAGGCCAAATACCCTAATGTTTACTCGAGCGACTTGCAATTTGTGTGCATGGATCTCGTGTACGAGTACACGCTTCTTGTTGATGGCTTCGGCATTGATTCTCGGAAGAGTATCACATTGGTGAAGCAGGTAGCATATCATGGTTCTCTTGCAGAGGCGGCATGGCCATTGGGCAATGCTGTAGCCATCGCCTCATCCCCAAAGTACTCAACTGCAACTTATTGA 1401 49.54 MATTGDARRNEFSISTLLLLSLSIVVVVFLLPVSSAGETSSFFNHRKMSAVGTSSNSTYAVIFDAGSSGSRVHVFHFDRNMDLLFIGSDIEVFSQIKPGLSSYADDPQKAADSLIPLLEKAEIAVPEKLQSVTPIRLGATAGLRFLEGDRSERILEAVRNLLKTKSGFMYGADSVSILDGNQEGSYQWLTVNYLLENLGKRYSNTVGVIDLGGGSVQMAYAISDEDAAKAPISSDGYSKFVQKFYLKGANYYLYVHSYLRYGLQAARVEILKVTEELGNPCILAGYQGTYAYGGKEYKASSPRSGSSFARCRSVILEALNINKSCGYNDCSFDGVWSGGGGAGVKNLYVASFFFDKAAQAGFIDSDKPDAIVKPIDFKRAARIACQTKFVDAKAKYPNVYSSDLQFVCMDLVYEYTLLVDGFGIDSRKSITLVKQVAYHGSLAEAAWPLGNAVAIASSPKYSTATY 466
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 6006495 6012507 - Carg26627-RA Car09g00963 154700
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car09g00963 466 Pfam GDA1/CD39 (nucleoside phosphatase) family 53 458 IPR000407 GO:0016787
Car09g00963 466 ProSitePatterns GDA1/CD39 family of nucleoside phosphatases signature. 178 193 IPR000407 GO:0016787
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car03g00214 Car-Chr3:3448514 Car09g00963 Car-Chr9:6006495 1.56E-178 dispersed
Car05g00773 Car-Chr5:6011040 Car09g00963 Car-Chr9:6006495 2.82E-45 dispersed
Car09g00963 Car-Chr9:6006495 Car13g00717 Car-Chr13:8363754 1.76E-20 dispersed
Car09g00963 Car-Chr9:6006495 Car07g01142 Car-Chr7:6862618 3.84E-171 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car09g00963 K14641 - gmx:100787491 521.161