Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car09g00975 ATGCTTGGTGACTCCACTACTTCCGTCTTGGGCGGTGGCGCCGCCGTGCCGGAGACGAATCATTGCCATGATGAGGTAATCGGCGACATGGGTGTAGCGGCGGCGGTGGTGGAGGAGATTAATAATAATTCTGGTGAAGAGGAGAGACGGAGAAGCGGAGGAGGAGGAGGAGGAGACGACGGTGACCGGAGCTTCGGCGGAAACCGGTGGCCGAGACAAGAAACCTTAGCTCTCCTGAAAATTCGCTCCGATTTGGACGTGGCTTTTCGAGATGCAAGCGTTAAAGGCCCTTTGTGGGAACAAGTTTCCAGGAAACTAGGGGAGCTTGGATATCATCGAAGTGCAAAGAAATGCAAAGAGAAATTTGAGAATGTTTACAAATACCATAAAAGAACAAGAGAAGTTCGTAGTGGGAAACCAGATAGCAAAACTTATAAATTTTTTGAACAATTAGAAGCTCTTGAGAATCACCCACCTTTTAATTTCAATCCACCGCCGCCACCTCCGCCGTCAACCACCGTCATTCCCACTGTTCCATCCACCACCACCACCACCCTACCCCACTTGATGAACATATCCTTCTCTCAACCAAATCCCACAATTCACCTCCCGTCTCCGCCCGCTCCGTTCAATAACCCTACCACCTCGTCCGTTCCCGTGGGGTTTCTTGAAGCGGATCTTATCTCGAATTCGACGTCGGATGATGTCGATGATTCATCGACATCATCCGACGAGGCACCGAGGAGGAGGACGAAGAAGAGGAAATGGAAGGAGTTTTTTGAGAGATTAATGAAGGAAGTGATTCAAAAACAAGTGGAAATGCAAAAGAGATTCTTGGAAGCTATTGAGAAAAGGGAACAAGAGAGAATTGTTAGAGAAGAAGCTTGGAGAATTCAAGAAATGGCTAAAATCAATAGAGAAAGAGAGATTTTAGCTCATGAAAGATCAATGGCGGCTGCTAAAGACGCCGCCATTACTTCGTTCCTCCAAAAAATAACCGAATCCCAACAGAATAACAACAACCACAACAACAACAATCTGTCACGAACACCACCGCCGCCACCGCCACCACAACAACAACCAATATCCATGTCAAATCCGACACCGGTCGTACAACCGCCACCGCCACCAGCACCGCCATCTTCATCGACATTGCAAGTAGTTCTTCCACAAAAGATGGAGATTATGAAAATGGATCATAATGGTGGGGAGAATTACACTATGAGTCCATCTTCAAGCTCATCAAGATGGCCAAAAGTGGAAGTAGAAGCATTGATCAAATTAAGAACAAATCTTGAAGCCAAATATCAAGAGAATGTACCAAAAGGGCCATTATGGGAAGAGATATCATCAGCCATGAAGAGAATAGGTTACAATAGAAATGCAAAGAGATGCAAAGAGAAATGGGAAAACATAAACAAATACTTCAAGAAAGTGAAGGAAACAAGAAAAACAAGGCCAGAGGATTCCAAGACATGCCCTTATTTCCACCAGCTCGATGCATTGTATAGGGAAAAGAGCGGCGGAAACAACAACAACAACAATAACAGGAAGCTCGAGCTCGAAAACATCGGTTCTTCGACGATGATTCCATTGATGGTTCAACCCGAACAACAATGGCCACCGCAGCAAGAGATCACCCGACCCGACTCGGGCAACGAAGAGATGGAGAGCGAACCGATGGATCGCGACGATAAAGACGACGATGATGATGATGAAGAGGAAGAGGACGAGGGTGGTGGGAACTATGAGATTGTGGCTAGCAAACCAACTTCGGTGAGTACTGCTGAGTGA 1794 46.43 MLGDSTTSVLGGGAAVPETNHCHDEVIGDMGVAAAVVEEINNNSGEEERRRSGGGGGGDDGDRSFGGNRWPRQETLALLKIRSDLDVAFRDASVKGPLWEQVSRKLGELGYHRSAKKCKEKFENVYKYHKRTREVRSGKPDSKTYKFFEQLEALENHPPFNFNPPPPPPPSTTVIPTVPSTTTTTLPHLMNISFSQPNPTIHLPSPPAPFNNPTTSSVPVGFLEADLISNSTSDDVDDSSTSSDEAPRRRTKKRKWKEFFERLMKEVIQKQVEMQKRFLEAIEKREQERIVREEAWRIQEMAKINREREILAHERSMAAAKDAAITSFLQKITESQQNNNNHNNNNLSRTPPPPPPPQQQPISMSNPTPVVQPPPPPAPPSSSTLQVVLPQKMEIMKMDHNGGENYTMSPSSSSSRWPKVEVEALIKLRTNLEAKYQENVPKGPLWEEISSAMKRIGYNRNAKRCKEKWENINKYFKKVKETRKTRPEDSKTCPYFHQLDALYREKSGGNNNNNNNRKLELENIGSSTMIPLMVQPEQQWPPQQEITRPDSGNEEMESEPMDRDDKDDDDDDEEEEDEGGGNYEIVASKPTSVSTAE 597
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 6170131 6172374 + Carg26652-RA Car09g00975 154712
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car09g00975 597 MobiDBLite consensus disorder prediction 42 57 - -
Car09g00975 597 MobiDBLite consensus disorder prediction 535 597 - -
Car09g00975 597 MobiDBLite consensus disorder prediction 535 549 - -
Car09g00975 597 MobiDBLite consensus disorder prediction 230 253 - -
Car09g00975 597 MobiDBLite consensus disorder prediction 348 383 - -
Car09g00975 597 Pfam Myb/SANT-like DNA-binding domain 415 502 IPR044822 -
Car09g00975 597 Pfam Myb/SANT-like DNA-binding domain 68 154 IPR044822 -
Car09g00975 597 ProSiteProfiles Myb-like domain profile. 409 473 IPR001005 -
Car09g00975 597 MobiDBLite consensus disorder prediction 557 581 - -
Car09g00975 597 MobiDBLite consensus disorder prediction 40 69 - -
Car09g00975 597 MobiDBLite consensus disorder prediction 336 384 - -
Car09g00975 597 ProSiteProfiles Myb-like domain profile. 68 126 IPR001005 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car09g00975 Car-Chr9:6170131 Car20g00935 Car-Chr20:10205691 2.02E-127 dispersed
Car09g00975 Car-Chr9:6170131 Car09g00976 Car-Chr9:6185021 6.06E-48 tandem
Car05g00751 Car-Chr5:5594288 Car09g00975 Car-Chr9:6170131 0 transposed
Car13g00293 Car-Chr13:5407009 Car09g00975 Car-Chr9:6170131 3.42E-17 transposed
Car01g00894 Car-Chr1:8279628 Car09g00975 Car-Chr9:6170131 2.35E-15 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
4100 PF13837 Myb_DNA-bind_4 7.50E-21 CL0123 Car TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car09g00975 - - cmos:111443426 961.059