Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Car09g00978 | ATGGGTCGAAAGAAGCCTACTGCACGGGATGATGACGGCGCCCCTGCGGCAGCCCAGGGTGGTGGGAAGTCGAAGAAGAAGACATTTGCAGTAGATGACGATGAGTACTCTATTGGAACCGAGTTGACTGAAGAAGCCCAAGATCAGGAGGTCAAGGTCGTGATAACGGGGAAGAAGAAGGGTAAGAAGGGCAATTCGAAAGCTTCACAACTTAAAGAAGATGATGATGATGATGATGTGGATGGTGTTTCTGAAATTGTTATCACCGGAAAGAAGAAGGGTAAGTCGAAGAAGGGTGGAAGTAGCAGTGCTTTTACTGCTTCCAGTTTTGGTTTGCTTGAAGAGGAGGGAAAGGACGGTGCTAATGATGATGACGATGATGATGAATCTGTGTTGACAGCAGAAAAGGATGATGATGAAGAGGAAGATTCTGTGATCAAGTTTTCAGGTAAGAAGAAGTCGTCGAAGTCTTCCAAGAAGAGTGGGTTTTCTGCAGTGTCAGCATTCGGTGCCCTCGATGATGAGAAAGATGAAGATGTAATTGATGATGAGAATGAAGAGATTGATGATGAGCCTGTTATTTCATTTACAGGTAAGAAGAAGAAGTCATCACAAGGTGGTAAGAAGGCCGGGAACGCATTTACAGGTTTTAGTGGTCTTGATTATGAAGATGAGGACAGAAATGATGATATGGATGATGGTGAAGATGTTACGACAATTACCTTCTCTGGTAAGAAAAAGAAGTCCTCTAAGGGTTCAAAGAAGAGTGGAAATTTGTTTAGTGCAGCGTTAGCAGATGAGGAAAATGATGGTGATGATTCTATTTCAAAGCCAGATAAATTAGACATTGATGGTGTTGATGAAGATGATGTCAATGTTATTTCATTTTCTGGCAAGAAGAAGTCCTCTAAGAAGAAAAGCAGCAGTACTTTTACTGCATTAAGTGATGAAAATGCGCTTGGCGATGAAATACTTAATACAGCAAGTAGCAATCTTGATTCTGATTTATCTAAAGCTAAGACGGAAGCGGTGGCTGAAACTTCAAAAAATAAAAAGAAAAAGAAGAAGAGCGGAAGAACTGCTCAAGAAGAAGATGATTTGGATAAGATTCTTGCTGAGCTAGGAGAGGGGCCAGCTACATCAAAACCAGCAGACCCTCCTCTTTCTTCACAAGAGGCTAAAGTTGAGAACCAACCTGAGGTTGTAGCTCCTCCTGAAAAGGAAGTGGAAGAAGAAAGCACAGAATCTGCTGCAGCAAGGAAGAAGAAAAAGAAGAAGGAGAAAGAGAAGGAAAAAAAGGCTGCAGCTGCGGCAGCAGCGGCTGCTGAAGGGAATGATGAGAAAATCGAGGAGGTGAAGACTGAAATTATTGAACCCAAAAAAGGTGCTGCGAAGGGTAAAGTGGTAGAGAAGAAAGTGCCAAAGCATGTTAGGGAGATGCAAGAGGCAATGGCTAGAAGAAAGGAAGAAGAAGAGCGAAGGAAAAGGGAAGAAGAAGAGAAATTGAGAAAGGAAGAAGAAGAGAGACGTAGACAAGAAGAACTTGAAAGGCAAGCTGAGGAGGCGAAGCGTAGGAAAAAGGAAAGAGAAAAAGAGAAGCTCCTACGGAAGAAACAGGAAGGCAAGCTGTTAACAGGGAAACAAAAGGAAGAACAACGGAGGCTGGAGGCAATGAGGAATCAAATATTATCAAATGCAGGGGGCTTACCTCTGTCTACATCTGACCCCAGTGCACCAGCTAAACGACCAAAATACCAGACAAAGAAGACAAAACCAGCCCACCATCAAACAAATGGTAGTGCACAGACTAAGGTAGTGGAACACGTAGAAGAAAGAATACAAGAAAAAGATGTGGCAGAGACTGAAATATTGGAATCTGAGAAGATTGAAGCTGTTGAGTCGACACTTGAGGAGGAAAAATCAGATGCTATTGAGGCTACTGTAGATAATGAAATTCAAGAAGACGAGGATGATGATGAATGGGATGCAAAGAGTTGGGATGATGCTGTTGTTGATCTTTCCTTAAAAAGTTCTTTTGCTGATGAGGAGCTTGAGTCTGAATCTGAGAATGGCATGAAAAAAGATAGAAAGAATAGTGCTCCAACTTCAGGCGGTGCAGTTGCCAAGCCAGCTGCCCCTGCCCAAAAAAGTTTACCTTCTCAGCCTATAAAATCTCAAGATATTGAAAACACAAAGAAGCAACATGAGGTTGAAGTTGTCGAAAAGGGCAAAGGAAAAGATGATGCTGTTAAGAAAAAAACTTCAATTCCGGATGCTACTCCTAAACAACAGGAAGAAAATCTCCGCTCACCCATCTGTTGTATTATGGGGCATGTTGATACTGGTAAAACCAAGCTACTGGACTGTATTCGTGGTACAAATGTTCAGGAGGGAGAGGCAGGAGGAATTACTCAGCAGATTGGGGCTACATATTTTCCTGCTGAGAACATTCGTGAAAGAACTAGGGAATTGAAAGCTGATGCAAAGCTGAAGGTTCCTGGCCTACTTATTATTGATACCCCTGGGCACGAATCGTTTACAAACTTGCGTTCTCGTGGTTCGGGTTTATGTGATCTTGCAATTTTGGTTGTTGACATCATGCATGGCTTAGAGCCACAAACAATAGAATCTCTTAATCTCTTGAGGATGAGAAACACAGAATTTATTATTGCTCTGAATAAGGTTGACAGACTTTATGGGTGGAAAACAATCCGCAATGCACCTATACTTAAGACAATGAAGCAGCAATCCAAAGATGTGCAGAATGAGTTCAATATGAGGCTTATTCAGATTATTACTCAATTTAAAGAGCAAGGATTAAATACCGAGCTTTATTATAAAAATAAAGAAATGGGGGAGACTTTCAGTATAGTACCTACAAGTGCTGTTACTGGTGAAGGTATTCCCGACATGTTACTACTATTGGTGCAGTGGGCCCAGAAAACCATGACGAAGAAACTTACGTATAGTGATGAAGTGCAGTGTACGGTCTTAGAGGTCAAGGTTGTTGAAGGCCATGGAACAACTATTGATGTCATATTGGTTAATGGTGTGCTGCATGAAGGAGATCAAATAGTTGTTTGTGGCATGCAGGGCCCAATTGTTACTACTATTCGAGCCCTATTGACGCCTCATCCAATGAAGGAACTCCGAGTGAAGGGAACATATCTGCATCATAAGGAAATCAAGGCTGCTCAGGGAATAAAAATAACTGGACAGGGTCTTGAGCATGCCATTGCTGGAACCAGTCTTCACGTGGTAGGTCCTGAGGATGACTTGGAAGACATTAAGGATTCAGCAATGGAAGATATGAAGTCAGTTTTGAGCAGGATAGACAGGTCTGGTGAGGGAGTCTGTGTTCAAGCATCTACACTTGGTTCCTTGGAAGCATTGTTGGAGTTTTTGAAGTCCCCGGCAGTGAGCATTCCTGTTAGTGGAATTAGTATAGGACCCGTTCATAAAAAGGATGTCATGAAAGCTAGTGTAATGCTTGAAAAGAAAAAAGAATATGCCACTATTTTGGCTTTTGATGTTAAAGTGACTCCAGAAGCTCGAGAACTTGCAGATGAGCTTGGTGTGAAGATTTTTATTGCTGATATCATCTATCACTTGTTCGACCAATTCAAGGCCTATATCGATAATCTTAAAGAGGAAAAGAAGAAAGAAGCTGCTGAGGAAGCAGTCTTTCCTTGTGTTCTTAAGATTTTACCAAATTGCATTTTCAACAAGAAGGATCCAATTGTGTTGGGGGTGGATGTGGTTGAAGGCATTGCCAAGGTTGGCACACCAGTTTGTATTCCTCAAAGAGAATTTATTGACATTGGTCGCATTGCATCTATTGAAAATAATCACAAACCTGTTGATTATGCAAAGAAAGGGCAGAAGATTGCCATTAAGATAGTCGGGCACTCTTCGGAGGAGCAGCAAAAGATGTACGGCAGGCATTTCGACTTGGAGGACGAACTCGTCAGCCATATATCAAGGAAGTCCATCGACCTTCTCAAAGCCAATTATCGGGATGACTTGTCCACGGATGAGTGGAGACTGGTGCTGGTTCGGGTCCGGTGTCGTTGGATTGATACGATGAAGATACAGAGGAAAGGTGGGGAGGAGGCAAGAACAGGTTGTTCCTTGAAAAGAACAGCTGTGCCTGCCGAGTTTGAGTTTCATGGAATGGATGATGATTGTTGA | 4191 | 42.33 | MGRKKPTARDDDGAPAAAQGGGKSKKKTFAVDDDEYSIGTELTEEAQDQEVKVVITGKKKGKKGNSKASQLKEDDDDDDVDGVSEIVITGKKKGKSKKGGSSSAFTASSFGLLEEEGKDGANDDDDDDESVLTAEKDDDEEEDSVIKFSGKKKSSKSSKKSGFSAVSAFGALDDEKDEDVIDDENEEIDDEPVISFTGKKKKSSQGGKKAGNAFTGFSGLDYEDEDRNDDMDDGEDVTTITFSGKKKKSSKGSKKSGNLFSAALADEENDGDDSISKPDKLDIDGVDEDDVNVISFSGKKKSSKKKSSSTFTALSDENALGDEILNTASSNLDSDLSKAKTEAVAETSKNKKKKKKSGRTAQEEDDLDKILAELGEGPATSKPADPPLSSQEAKVENQPEVVAPPEKEVEEESTESAAARKKKKKKEKEKEKKAAAAAAAAAEGNDEKIEEVKTEIIEPKKGAAKGKVVEKKVPKHVREMQEAMARRKEEEERRKREEEEKLRKEEEERRRQEELERQAEEAKRRKKEREKEKLLRKKQEGKLLTGKQKEEQRRLEAMRNQILSNAGGLPLSTSDPSAPAKRPKYQTKKTKPAHHQTNGSAQTKVVEHVEERIQEKDVAETEILESEKIEAVESTLEEEKSDAIEATVDNEIQEDEDDDEWDAKSWDDAVVDLSLKSSFADEELESESENGMKKDRKNSAPTSGGAVAKPAAPAQKSLPSQPIKSQDIENTKKQHEVEVVEKGKGKDDAVKKKTSIPDATPKQQEENLRSPICCIMGHVDTGKTKLLDCIRGTNVQEGEAGGITQQIGATYFPAENIRERTRELKADAKLKVPGLLIIDTPGHESFTNLRSRGSGLCDLAILVVDIMHGLEPQTIESLNLLRMRNTEFIIALNKVDRLYGWKTIRNAPILKTMKQQSKDVQNEFNMRLIQIITQFKEQGLNTELYYKNKEMGETFSIVPTSAVTGEGIPDMLLLLVQWAQKTMTKKLTYSDEVQCTVLEVKVVEGHGTTIDVILVNGVLHEGDQIVVCGMQGPIVTTIRALLTPHPMKELRVKGTYLHHKEIKAAQGIKITGQGLEHAIAGTSLHVVGPEDDLEDIKDSAMEDMKSVLSRIDRSGEGVCVQASTLGSLEALLEFLKSPAVSIPVSGISIGPVHKKDVMKASVMLEKKKEYATILAFDVKVTPEARELADELGVKIFIADIIYHLFDQFKAYIDNLKEEKKKEAAEEAVFPCVLKILPNCIFNKKDPIVLGVDVVEGIAKVGTPVCIPQREFIDIGRIASIENNHKPVDYAKKGQKIAIKIVGHSSEEQQKMYGRHFDLEDELVSHISRKSIDLLKANYRDDLSTDEWRLVLVRVRCRWIDTMKIQRKGGEEARTGCSLKRTAVPAEFEFHGMDDDC | 1396 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
9 | 6216569 | 6227599 | + | Carg26655-RA | Car09g00978 | 154715 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Car09g00978 | 1396 | Coils | Coil | 409 | 445 | - | - | |
Car09g00978 | 1396 | MobiDBLite | consensus disorder prediction | 605 | 647 | - | - | |
Car09g00978 | 1396 | MobiDBLite | consensus disorder prediction | 678 | 696 | - | - | |
Car09g00978 | 1396 | MobiDBLite | consensus disorder prediction | 444 | 557 | - | - | |
Car09g00978 | 1396 | MobiDBLite | consensus disorder prediction | 270 | 284 | - | - | |
Car09g00978 | 1396 | Pfam | Translation-initiation factor 2 | 1097 | 1209 | IPR023115 | - | |
Car09g00978 | 1396 | Coils | Coil | 473 | 540 | - | - | |
Car09g00978 | 1396 | MobiDBLite | consensus disorder prediction | 401 | 422 | - | - | |
Car09g00978 | 1396 | MobiDBLite | consensus disorder prediction | 175 | 191 | - | - | |
Car09g00978 | 1396 | MobiDBLite | consensus disorder prediction | 1 | 764 | - | - | |
Car09g00978 | 1396 | Coils | Coil | 1205 | 1225 | - | - | |
Car09g00978 | 1396 | MobiDBLite | consensus disorder prediction | 728 | 759 | - | - | |
Car09g00978 | 1396 | MobiDBLite | consensus disorder prediction | 307 | 338 | - | - | |
Car09g00978 | 1396 | MobiDBLite | consensus disorder prediction | 357 | 372 | - | - | |
Car09g00978 | 1396 | ProSiteProfiles | Translational (tr)-type guanine nucleotide-binding (G) domain profile. | 768 | 984 | IPR000795 | GO:0003924|GO:0005525 | |
Car09g00978 | 1396 | Pfam | Elongation factor Tu domain 2 | 1007 | 1084 | IPR004161 | GO:0005525 | |
Car09g00978 | 1396 | MobiDBLite | consensus disorder prediction | 648 | 665 | - | - | |
Car09g00978 | 1396 | MobiDBLite | consensus disorder prediction | 118 | 142 | - | - | |
Car09g00978 | 1396 | Pfam | Elongation factor Tu GTP binding domain | 772 | 980 | IPR000795 | GO:0003924|GO:0005525 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Car01g01154 | Car-Chr1:10644827 | Car09g00978 | Car-Chr9:6216569 | 1.14E-27 | transposed | |
Car04g00654 | Car-Chr4:3737871 | Car09g00978 | Car-Chr9:6216569 | 2.97E-22 | transposed | |
Car01g00890 | Car-Chr1:8238093 | Car09g00978 | Car-Chr9:6216569 | 0 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Car09g00978 | K03243 | - | csv:101204360 | 1879.37 |