Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Car09g00978 ATGGGTCGAAAGAAGCCTACTGCACGGGATGATGACGGCGCCCCTGCGGCAGCCCAGGGTGGTGGGAAGTCGAAGAAGAAGACATTTGCAGTAGATGACGATGAGTACTCTATTGGAACCGAGTTGACTGAAGAAGCCCAAGATCAGGAGGTCAAGGTCGTGATAACGGGGAAGAAGAAGGGTAAGAAGGGCAATTCGAAAGCTTCACAACTTAAAGAAGATGATGATGATGATGATGTGGATGGTGTTTCTGAAATTGTTATCACCGGAAAGAAGAAGGGTAAGTCGAAGAAGGGTGGAAGTAGCAGTGCTTTTACTGCTTCCAGTTTTGGTTTGCTTGAAGAGGAGGGAAAGGACGGTGCTAATGATGATGACGATGATGATGAATCTGTGTTGACAGCAGAAAAGGATGATGATGAAGAGGAAGATTCTGTGATCAAGTTTTCAGGTAAGAAGAAGTCGTCGAAGTCTTCCAAGAAGAGTGGGTTTTCTGCAGTGTCAGCATTCGGTGCCCTCGATGATGAGAAAGATGAAGATGTAATTGATGATGAGAATGAAGAGATTGATGATGAGCCTGTTATTTCATTTACAGGTAAGAAGAAGAAGTCATCACAAGGTGGTAAGAAGGCCGGGAACGCATTTACAGGTTTTAGTGGTCTTGATTATGAAGATGAGGACAGAAATGATGATATGGATGATGGTGAAGATGTTACGACAATTACCTTCTCTGGTAAGAAAAAGAAGTCCTCTAAGGGTTCAAAGAAGAGTGGAAATTTGTTTAGTGCAGCGTTAGCAGATGAGGAAAATGATGGTGATGATTCTATTTCAAAGCCAGATAAATTAGACATTGATGGTGTTGATGAAGATGATGTCAATGTTATTTCATTTTCTGGCAAGAAGAAGTCCTCTAAGAAGAAAAGCAGCAGTACTTTTACTGCATTAAGTGATGAAAATGCGCTTGGCGATGAAATACTTAATACAGCAAGTAGCAATCTTGATTCTGATTTATCTAAAGCTAAGACGGAAGCGGTGGCTGAAACTTCAAAAAATAAAAAGAAAAAGAAGAAGAGCGGAAGAACTGCTCAAGAAGAAGATGATTTGGATAAGATTCTTGCTGAGCTAGGAGAGGGGCCAGCTACATCAAAACCAGCAGACCCTCCTCTTTCTTCACAAGAGGCTAAAGTTGAGAACCAACCTGAGGTTGTAGCTCCTCCTGAAAAGGAAGTGGAAGAAGAAAGCACAGAATCTGCTGCAGCAAGGAAGAAGAAAAAGAAGAAGGAGAAAGAGAAGGAAAAAAAGGCTGCAGCTGCGGCAGCAGCGGCTGCTGAAGGGAATGATGAGAAAATCGAGGAGGTGAAGACTGAAATTATTGAACCCAAAAAAGGTGCTGCGAAGGGTAAAGTGGTAGAGAAGAAAGTGCCAAAGCATGTTAGGGAGATGCAAGAGGCAATGGCTAGAAGAAAGGAAGAAGAAGAGCGAAGGAAAAGGGAAGAAGAAGAGAAATTGAGAAAGGAAGAAGAAGAGAGACGTAGACAAGAAGAACTTGAAAGGCAAGCTGAGGAGGCGAAGCGTAGGAAAAAGGAAAGAGAAAAAGAGAAGCTCCTACGGAAGAAACAGGAAGGCAAGCTGTTAACAGGGAAACAAAAGGAAGAACAACGGAGGCTGGAGGCAATGAGGAATCAAATATTATCAAATGCAGGGGGCTTACCTCTGTCTACATCTGACCCCAGTGCACCAGCTAAACGACCAAAATACCAGACAAAGAAGACAAAACCAGCCCACCATCAAACAAATGGTAGTGCACAGACTAAGGTAGTGGAACACGTAGAAGAAAGAATACAAGAAAAAGATGTGGCAGAGACTGAAATATTGGAATCTGAGAAGATTGAAGCTGTTGAGTCGACACTTGAGGAGGAAAAATCAGATGCTATTGAGGCTACTGTAGATAATGAAATTCAAGAAGACGAGGATGATGATGAATGGGATGCAAAGAGTTGGGATGATGCTGTTGTTGATCTTTCCTTAAAAAGTTCTTTTGCTGATGAGGAGCTTGAGTCTGAATCTGAGAATGGCATGAAAAAAGATAGAAAGAATAGTGCTCCAACTTCAGGCGGTGCAGTTGCCAAGCCAGCTGCCCCTGCCCAAAAAAGTTTACCTTCTCAGCCTATAAAATCTCAAGATATTGAAAACACAAAGAAGCAACATGAGGTTGAAGTTGTCGAAAAGGGCAAAGGAAAAGATGATGCTGTTAAGAAAAAAACTTCAATTCCGGATGCTACTCCTAAACAACAGGAAGAAAATCTCCGCTCACCCATCTGTTGTATTATGGGGCATGTTGATACTGGTAAAACCAAGCTACTGGACTGTATTCGTGGTACAAATGTTCAGGAGGGAGAGGCAGGAGGAATTACTCAGCAGATTGGGGCTACATATTTTCCTGCTGAGAACATTCGTGAAAGAACTAGGGAATTGAAAGCTGATGCAAAGCTGAAGGTTCCTGGCCTACTTATTATTGATACCCCTGGGCACGAATCGTTTACAAACTTGCGTTCTCGTGGTTCGGGTTTATGTGATCTTGCAATTTTGGTTGTTGACATCATGCATGGCTTAGAGCCACAAACAATAGAATCTCTTAATCTCTTGAGGATGAGAAACACAGAATTTATTATTGCTCTGAATAAGGTTGACAGACTTTATGGGTGGAAAACAATCCGCAATGCACCTATACTTAAGACAATGAAGCAGCAATCCAAAGATGTGCAGAATGAGTTCAATATGAGGCTTATTCAGATTATTACTCAATTTAAAGAGCAAGGATTAAATACCGAGCTTTATTATAAAAATAAAGAAATGGGGGAGACTTTCAGTATAGTACCTACAAGTGCTGTTACTGGTGAAGGTATTCCCGACATGTTACTACTATTGGTGCAGTGGGCCCAGAAAACCATGACGAAGAAACTTACGTATAGTGATGAAGTGCAGTGTACGGTCTTAGAGGTCAAGGTTGTTGAAGGCCATGGAACAACTATTGATGTCATATTGGTTAATGGTGTGCTGCATGAAGGAGATCAAATAGTTGTTTGTGGCATGCAGGGCCCAATTGTTACTACTATTCGAGCCCTATTGACGCCTCATCCAATGAAGGAACTCCGAGTGAAGGGAACATATCTGCATCATAAGGAAATCAAGGCTGCTCAGGGAATAAAAATAACTGGACAGGGTCTTGAGCATGCCATTGCTGGAACCAGTCTTCACGTGGTAGGTCCTGAGGATGACTTGGAAGACATTAAGGATTCAGCAATGGAAGATATGAAGTCAGTTTTGAGCAGGATAGACAGGTCTGGTGAGGGAGTCTGTGTTCAAGCATCTACACTTGGTTCCTTGGAAGCATTGTTGGAGTTTTTGAAGTCCCCGGCAGTGAGCATTCCTGTTAGTGGAATTAGTATAGGACCCGTTCATAAAAAGGATGTCATGAAAGCTAGTGTAATGCTTGAAAAGAAAAAAGAATATGCCACTATTTTGGCTTTTGATGTTAAAGTGACTCCAGAAGCTCGAGAACTTGCAGATGAGCTTGGTGTGAAGATTTTTATTGCTGATATCATCTATCACTTGTTCGACCAATTCAAGGCCTATATCGATAATCTTAAAGAGGAAAAGAAGAAAGAAGCTGCTGAGGAAGCAGTCTTTCCTTGTGTTCTTAAGATTTTACCAAATTGCATTTTCAACAAGAAGGATCCAATTGTGTTGGGGGTGGATGTGGTTGAAGGCATTGCCAAGGTTGGCACACCAGTTTGTATTCCTCAAAGAGAATTTATTGACATTGGTCGCATTGCATCTATTGAAAATAATCACAAACCTGTTGATTATGCAAAGAAAGGGCAGAAGATTGCCATTAAGATAGTCGGGCACTCTTCGGAGGAGCAGCAAAAGATGTACGGCAGGCATTTCGACTTGGAGGACGAACTCGTCAGCCATATATCAAGGAAGTCCATCGACCTTCTCAAAGCCAATTATCGGGATGACTTGTCCACGGATGAGTGGAGACTGGTGCTGGTTCGGGTCCGGTGTCGTTGGATTGATACGATGAAGATACAGAGGAAAGGTGGGGAGGAGGCAAGAACAGGTTGTTCCTTGAAAAGAACAGCTGTGCCTGCCGAGTTTGAGTTTCATGGAATGGATGATGATTGTTGA 4191 42.33 MGRKKPTARDDDGAPAAAQGGGKSKKKTFAVDDDEYSIGTELTEEAQDQEVKVVITGKKKGKKGNSKASQLKEDDDDDDVDGVSEIVITGKKKGKSKKGGSSSAFTASSFGLLEEEGKDGANDDDDDDESVLTAEKDDDEEEDSVIKFSGKKKSSKSSKKSGFSAVSAFGALDDEKDEDVIDDENEEIDDEPVISFTGKKKKSSQGGKKAGNAFTGFSGLDYEDEDRNDDMDDGEDVTTITFSGKKKKSSKGSKKSGNLFSAALADEENDGDDSISKPDKLDIDGVDEDDVNVISFSGKKKSSKKKSSSTFTALSDENALGDEILNTASSNLDSDLSKAKTEAVAETSKNKKKKKKSGRTAQEEDDLDKILAELGEGPATSKPADPPLSSQEAKVENQPEVVAPPEKEVEEESTESAAARKKKKKKEKEKEKKAAAAAAAAAEGNDEKIEEVKTEIIEPKKGAAKGKVVEKKVPKHVREMQEAMARRKEEEERRKREEEEKLRKEEEERRRQEELERQAEEAKRRKKEREKEKLLRKKQEGKLLTGKQKEEQRRLEAMRNQILSNAGGLPLSTSDPSAPAKRPKYQTKKTKPAHHQTNGSAQTKVVEHVEERIQEKDVAETEILESEKIEAVESTLEEEKSDAIEATVDNEIQEDEDDDEWDAKSWDDAVVDLSLKSSFADEELESESENGMKKDRKNSAPTSGGAVAKPAAPAQKSLPSQPIKSQDIENTKKQHEVEVVEKGKGKDDAVKKKTSIPDATPKQQEENLRSPICCIMGHVDTGKTKLLDCIRGTNVQEGEAGGITQQIGATYFPAENIRERTRELKADAKLKVPGLLIIDTPGHESFTNLRSRGSGLCDLAILVVDIMHGLEPQTIESLNLLRMRNTEFIIALNKVDRLYGWKTIRNAPILKTMKQQSKDVQNEFNMRLIQIITQFKEQGLNTELYYKNKEMGETFSIVPTSAVTGEGIPDMLLLLVQWAQKTMTKKLTYSDEVQCTVLEVKVVEGHGTTIDVILVNGVLHEGDQIVVCGMQGPIVTTIRALLTPHPMKELRVKGTYLHHKEIKAAQGIKITGQGLEHAIAGTSLHVVGPEDDLEDIKDSAMEDMKSVLSRIDRSGEGVCVQASTLGSLEALLEFLKSPAVSIPVSGISIGPVHKKDVMKASVMLEKKKEYATILAFDVKVTPEARELADELGVKIFIADIIYHLFDQFKAYIDNLKEEKKKEAAEEAVFPCVLKILPNCIFNKKDPIVLGVDVVEGIAKVGTPVCIPQREFIDIGRIASIENNHKPVDYAKKGQKIAIKIVGHSSEEQQKMYGRHFDLEDELVSHISRKSIDLLKANYRDDLSTDEWRLVLVRVRCRWIDTMKIQRKGGEEARTGCSLKRTAVPAEFEFHGMDDDC 1396
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
9 6216569 6227599 + Carg26655-RA Car09g00978 154715
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Car09g00978 1396 Coils Coil 409 445 - -
Car09g00978 1396 MobiDBLite consensus disorder prediction 605 647 - -
Car09g00978 1396 MobiDBLite consensus disorder prediction 678 696 - -
Car09g00978 1396 MobiDBLite consensus disorder prediction 444 557 - -
Car09g00978 1396 MobiDBLite consensus disorder prediction 270 284 - -
Car09g00978 1396 Pfam Translation-initiation factor 2 1097 1209 IPR023115 -
Car09g00978 1396 Coils Coil 473 540 - -
Car09g00978 1396 MobiDBLite consensus disorder prediction 401 422 - -
Car09g00978 1396 MobiDBLite consensus disorder prediction 175 191 - -
Car09g00978 1396 MobiDBLite consensus disorder prediction 1 764 - -
Car09g00978 1396 Coils Coil 1205 1225 - -
Car09g00978 1396 MobiDBLite consensus disorder prediction 728 759 - -
Car09g00978 1396 MobiDBLite consensus disorder prediction 307 338 - -
Car09g00978 1396 MobiDBLite consensus disorder prediction 357 372 - -
Car09g00978 1396 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 768 984 IPR000795 GO:0003924|GO:0005525
Car09g00978 1396 Pfam Elongation factor Tu domain 2 1007 1084 IPR004161 GO:0005525
Car09g00978 1396 MobiDBLite consensus disorder prediction 648 665 - -
Car09g00978 1396 MobiDBLite consensus disorder prediction 118 142 - -
Car09g00978 1396 Pfam Elongation factor Tu GTP binding domain 772 980 IPR000795 GO:0003924|GO:0005525
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car01g01154 Car-Chr1:10644827 Car09g00978 Car-Chr9:6216569 1.14E-27 transposed
Car04g00654 Car-Chr4:3737871 Car09g00978 Car-Chr9:6216569 2.97E-22 transposed
Car01g00890 Car-Chr1:8238093 Car09g00978 Car-Chr9:6216569 0 wgd
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car09g00978 K03243 - csv:101204360 1879.37