Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Car09g00979 ATGGAGACGAGCAATAAGCATTCAATTGTAGACGAAATCCAATCCCAACCCTTCGACTACTCGAAACGTGCTCAATGGTTACGCGCCGCCGTGCTAGGCGCCAACGACGGTCTCGTCTCAACCGCATCTCTCATGATGGGTATCGGCGCCGTCAAGCACGACGTTAAAGCCATGATCCTCACCGGTTTCGCTGGTCTCATTGCCGGTGCCTGCAGCATGGCGATCGGTGAGTTCGTCTCTGTTTACTCTCAATTGGATATAGAAATGGCCCATATAAGAAGAAACAAGGACTTGGAGGAAGAGGAGAGAGAGAAACTGCCAAACCCTCTTCAGGCGGCAGCTGCCTCGGCGTTGGCCTTTTCCATCGGAGCTATGGTGCCACTACTGGCGGCGGCGTTCATTAGGGAGTATAGGGTTCGGCTAGGAGTTGTGGTGGCTGCAGTGACTATGGCTCTAGTAGGGTTTGGGTGGCTAGGGGCAGCGTTGGGGAAGGCACCAACGGTGAGGTCGGCGGTGAGGGTCTTGATCGGAGGGTGGACGGCGATGGCTGTGACTTTTGGGTTGACCAAGTTGATTGGATCAAGTGGACTATGA 594 54.55 METSNKHSIVDEIQSQPFDYSKRAQWLRAAVLGANDGLVSTASLMMGIGAVKHDVKAMILTGFAGLIAGACSMAIGEFVSVYSQLDIEMAHIRRNKDLEEEEREKLPNPLQAAAASALAFSIGAMVPLLAAAFIREYRVRLGVVVAAVTMALVGFGWLGAALGKAPTVRSAVRVLIGGWTAMAVTFGLTKLIGSSGL 197
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
9 6229726 6231140 - Carg26656-RA Car09g00979 154716
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Car09g00979 197 Pfam VIT family 102 189 IPR008217 GO:0005384|GO:0030026
Car09g00979 197 Pfam VIT family 27 103 IPR008217 GO:0005384|GO:0030026
Car09g00979 197 Coils Coil 82 102 - -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car09g00979 Car-Chr9:6229726 Car15g00555 Car-Chr15:3060715 2.01E-83 dispersed
Car09g00979 Car-Chr9:6229726 Car04g02354 Car-Chr4:18932856 7.72E-103 transposed
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car09g00979 K22736 - csv:101210510 327.405