Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car09g00985 ATGTCGTTAGTCAGGCCATCTGATCCGTCTCCGTTATCGTACGGAAGTCGCAAGCTCTACTCGCTGAACGGAACCAAGAATGCTCCTGACTTGTCTGCTCAAAGATTTGGCTCCGAAATGCATAGGAGTGAGAGCTATGAGAAGTATTTCCTTGACTTCCCGATCGAAGAGCTATCGATTTCTGGCGTTTCTGGCATTTCGAACAATTCTTTTCACCCGAACGCTGCTTCATATGGGCGAACGTGTGATTCAGATTCAGCTTGCCTTGAGATTACAAGTCCAGAACAGCTGGATTTTGGGGATGATCAAGTGAGACTGAAGTTGCAAGAATTGGAGAGGGACCTGTTGGGTGAACCTGATGCTGCTGATTACGATGTCGAGATGCTTGCAAATGGTCAAGCCATGGAAATCGATAGCGAATGGGCGAATTCGATTAAAGATGCACTGCTACACGACTCGCCAAACGAATCCTCGTCGACAGATTCTAATTTCAGTACAACTGGCAGCAACAAGGATGCATCTCAGATGTCTTCACAGAATCCTAGAGAAATGCTTTTAGAATGTGCTTTTGCCATCTCGGAAGACAACTTTGACGAAGCATCAGCCATGATCGAACAGCTCCGAGGTATGGTCTCGGTTCAGGGCGATCCCTCGCAGAGGATCGCTGCGTATATGGTGGAAGGTCTCGCTGCTCGGTTGTTGGCATCGGGAAAATGTCTTTATAAAGCTTTGAGATGCAAAGAACCGCCTTCCTCGGACCGTCTCGCAGCTATGCAGATCCTTTTCGAGGTCTGCCCTTGTTTCAAATTCGGCTTTATGGCTGCAAATTGTGCCATTATCGAGGCAGCGAAAGACGAGAAGAGAATTCACATAATCGATTTCGATGTAAGCCAAGGAACTCAGTACATAAATTTGATTCAGATGCTAGCAACTCAGCCAGGGAAGCCACCACACTTGAGGTTAACAGGGGTCGATGATCCCGAATCGGTACATCGACCCATTGGAGGTCTTAAACACATTGGACAAAGACTCGAGCAACTGGCAAAAGCGTTACGAGTTCCATTTGAATTTCAAGCAATTGCCTCGAACACTTCTGATGTCACTCCCTCGATGCTCGCCTCCCGCCACGGAGAAGCAGTCATAGTCAACTTCGCATTTCTGCTTCACCACATGCCAGATGAAAGTGTCTCAACCGTAAATCTACGAGACAAGCTTCTCCGAATGGTTAAGAACTTAAACCCGAAACTAGTAACAGTCGTCGAACAGGACATGAACACAAACACCACCCCATTCTTTTCAAGATTTGTCGAAACCTATAACTACTTTGCAGCTGTCTACGACACTCTCGATGCGACACTTCCGAGAGAGAGTCAAGACCGAATCAATGTAGAGAGGCAATGCTTGGCAAAGGACATAGTCAACATCGTAGCTTGTGAAGGCGAGGACAGAGTGGAGAGATACGAAGTGGCCGGGAAATGGCGGGCAAGAATGACGATGGCTGGGTTCAGTTCCTGTACGATGAGCCAAAACGTGACCGACCCGATTCGTAAGCTTATCGGGGAGTATTGCGAGAGAAGATTGAAGATGTATGAAGAAATGGGCACAGTTCATTTTGGATGGGAAGAGAAAAGCTTGATTATTACTTCAACATGGAGGTAA 1659 47.02 MSLVRPSDPSPLSYGSRKLYSLNGTKNAPDLSAQRFGSEMHRSESYEKYFLDFPIEELSISGVSGISNNSFHPNAASYGRTCDSDSACLEITSPEQLDFGDDQVRLKLQELERDLLGEPDAADYDVEMLANGQAMEIDSEWANSIKDALLHDSPNESSSTDSNFSTTGSNKDASQMSSQNPREMLLECAFAISEDNFDEASAMIEQLRGMVSVQGDPSQRIAAYMVEGLAARLLASGKCLYKALRCKEPPSSDRLAAMQILFEVCPCFKFGFMAANCAIIEAAKDEKRIHIIDFDVSQGTQYINLIQMLATQPGKPPHLRLTGVDDPESVHRPIGGLKHIGQRLEQLAKALRVPFEFQAIASNTSDVTPSMLASRHGEAVIVNFAFLLHHMPDESVSTVNLRDKLLRMVKNLNPKLVTVVEQDMNTNTTPFFSRFVETYNYFAAVYDTLDATLPRESQDRINVERQCLAKDIVNIVACEGEDRVERYEVAGKWRARMTMAGFSSCTMSQNVTDPIRKLIGEYCERRLKMYEEMGTVHFGWEEKSLIITSTWR 552
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 6331139 6332797 + Carg27257-RA Car09g00985 154722
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car09g00985 552 Pfam GRAS domain family 182 552 IPR005202 -
Car09g00985 552 MobiDBLite consensus disorder prediction 150 178 - -
Car09g00985 552 ProSiteProfiles GRAS family profile. 172 552 IPR005202 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car09g00985 Car-Chr9:6331139 Car20g00575 Car-Chr20:3226120 2.06E-149 dispersed
Car18g00539 Car-Chr18:4342363 Car09g00985 Car-Chr9:6331139 1.09E-17 dispersed
Car01g00889 Car-Chr1:8233682 Car09g00985 Car-Chr9:6331139 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
4102 PF03514 GRAS 1.00E-127 CL0063 Car TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car09g00985 - - csv:101206511 944.11