Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car09g01089 ATGGACTTGGTTTGTCTGATTGATCCGTTCGTTATTTTATATCGCTATGCAGCCGAAGAGGATCCGGAAGTGCATCTGGGACAGCTCAAAAGATTTTCACTGAGAGAGCTACAAGTAGCTACTGATAGTTTTAGTAACAAGAACATACTTGGTCGGGGTGGATTTGGTAAGGTCTACAAAGGTCGATTGGCAGACGGTTCTTTAGTCGCCGTAAAAAGACTCAAGGAAGAACGTACGCCTGGTGGAGAGTTGCAGTTTCAAACAGAAGTCGAGATGATCAGCATGGCTGTACATCGGAACCTGCTACGATTACGTGGATTTTGCATGACGCCAACCGAACGACTTCTTGTTTATCCGTACATGGCCAATGGAAGTGTTGCGTCTTGCTTAAGAGAACGACCACCATCCCAACCACCTCTTGATTGGAGAACGAGAAAGCGAATAGCATTGGGATCAGCAAGAGGGTTGTCTTATTTACACGATCACTGTGATCCAAAGATCATTCACCGTGACGTAAAAGCTGCAAATATTTTGCTAGATGAGGAGTTCGAAGCTGTCGTAGGTGACTTCGGGCTGGCCAAACTCATGGATTACAAAGATACTCATGTCACCACCGCGGTACGTGGTACAATTGGACATATAGCTCCCGAGTATCTTTCCACTGGTAAGTCCTCTGAGAAAACAGACGTTTTCGGGTACGGTATCATGCTTCTAGAGCTTATAACTGGTCAAAGAGCTTTCGATTTGGCTCGACTCGCCAATGACGATGATGTCATGCTACTCGATTGGGTGAAAGGACTCCTGAAAGAGAAGAAGCTAGAAATGCTGGTTGACCCTGACCTTCAGAATAACTATGTCGAATCCGAGGTCGAACAGTTGATTCAAGTAGCGCTACTCTGCACACAAGGCTCCCCGATGGACCGACCGAAGATGTCGGAGGTGGTTCGAATGCTGGAAGGAGACGGGTTGGCAGAAAGATGGGATGAGTGGCAAAAGGTGGAGATCCTTCGACAAGAAATCGACCTATCGCCCCATCCAAATTCGGATTGGATTGTGGATTCGACTGAAAATCTACATGCAGTCGAGCTTTCTGGTCCGAGATGA 1104 46.83 MDLVCLIDPFVILYRYAAEEDPEVHLGQLKRFSLRELQVATDSFSNKNILGRGGFGKVYKGRLADGSLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQPPLDWRTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEMLVDPDLQNNYVESEVEQLIQVALLCTQGSPMDRPKMSEVVRMLEGDGLAERWDEWQKVEILRQEIDLSPHPNSDWIVDSTENLHAVELSGPR 367
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 10183414 10185096 - Carg28174-RA Car09g01089 154826
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car09g01089 367 ProSitePatterns Protein kinases ATP-binding region signature. 50 72 IPR017441 GO:0005524
Car09g01089 367 ProSitePatterns Serine/Threonine protein kinases active-site signature. 167 179 IPR008271 GO:0004672|GO:0006468
Car09g01089 367 Pfam Protein kinase domain 45 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car09g01089 367 ProSiteProfiles Protein kinase domain profile. 44 331 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car09g01089 Car-Chr9:10183414 Car16g00232 Car-Chr16:1299400 0 dispersed
Car09g01089 Car-Chr9:10183414 Car04g00361 Car-Chr4:2040497 0 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
89106 PF00069 Pkinase 2.20E-45 CL0016 Car PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car09g01089 K13418 - csv:101208695 691.034