Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Car09g01127 ATGGGAGATCCTAGCTCAACGGGCAGCCACGGCGCAGCGACGTCGAGCTACCGAGGCGTTCGCAAGAGGAAATGGGGCAAATGGGTGTCGGAGATTCGCGAGCCAGGAAAGAAGACGAGAATTTGGTTAGGGAGTTTCGAGACACCGGAGATGGCGGCGGCGGCTTACGATGCTGCTGCCTATCACTTCCGCGGTCATGATGCTCGTCTCAACTTCCCACATCTTGCCAACTCTCTCCCCTTCCCTAATGGCTCCACTCCTGATGATATCCGTTTCGCTGCCCATAGAGCAGCATTGCGAGTACGAACAACACCAGGTGTTGCGGCGGAGGGTGATCGGAGTTCCACGTCGAGTGTTGCACCGGTCACTGTTCGACTATCGCCGAGCCAAATTCAGGCGATTAACGAGTCGCCATTGGACTCGCCGAAGATGTGGATGGAAATGTCGTCGGAGTTTTCGAATGGGACTGTGTTTGTTGATGAGATGGAGGATGCGATGTGGGAGAATATGCATAATGATTCATTGTGGGATCCTTAG 537 54.38 MGDPSSTGSHGAATSSYRGVRKRKWGKWVSEIREPGKKTRIWLGSFETPEMAAAAYDAAAYHFRGHDARLNFPHLANSLPFPNGSTPDDIRFAAHRAALRVRTTPGVAAEGDRSSTSSVAPVTVRLSPSQIQAINESPLDSPKMWMEMSSEFSNGTVFVDEMEDAMWENMHNDSLWDP 178
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
9 11766705 11767241 - Carg27905-RA Car09g01127 154864
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Car09g01127 178 Pfam AP2 domain 16 66 IPR001471 GO:0003700|GO:0006355
Car09g01127 178 MobiDBLite consensus disorder prediction 1 22 - -
Car09g01127 178 ProSiteProfiles AP2/ERF domain profile. 16 73 IPR001471 GO:0003700|GO:0006355
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car01g00784 Car-Chr1:5082921 Car09g01127 Car-Chr9:11766705 3.06E-83 dispersed
Car09g01127 Car-Chr9:11766705 Car16g01062 Car-Chr16:9136091 1.51E-31 dispersed
Car09g01125 Car-Chr9:11729544 Car09g01127 Car-Chr9:11766705 3.71E-53 proximal
       

Transcription factors information


Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
4114 PF00847 AP2 5.90E-14 CL0081 Car TF
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car09g01127 - - csv:101207243 292.352