Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car09g01138 ATGCAGATTGGACAGGGAACTTACAGCAGTGTATATAAAGCCCGTGACCTTGAAACTGGTAAAATCGTGGCATTGAAAAAAGTGAGATTTGTAAATAAGGATCCCGAAAGTGTCCGTTTTATGGCTAGGGAAATATATATTTTGCGCAAACTGGATCATCCAAATGTTATGAAGCTCGAGGCTCTAGTCGCTTCCAGAATGTCGAGCAACTTGTACCTTGTTTTTGAGTACATGGAGCATGACCTTGCTGGTCTTGTGGCAGCTCCTGGACATAAGTTTACGGAGGCTCAAATTAAATGTTACGTGCAACAATTGCTGCATGGACTCGAACACTGTCATAGTCGGGGTATTCTACACCGGGATATCAAAGCTTCAAATCTTCTCATTGACAATAATGGTGTGCTCAAGATTGCAGACTTTGGACTTGCTACCTCTTTTCATCCTGATCGAAAGCAGCCATTGACAAGTCGGGTAGTGACGTTGTGGTACAGGGCACCCGAGCTTTTGCTCGGCGCTACTCAATATGGACCTGCCATAGATCTCTGGAGCTGTGGTTGTATCGTTGCTGAACTATTTGCTGGAAAACCTATTATGCCAGGAAGAACAGAGGTGGAACAAATCCACAAGATTTTTAAGCTCTGTGGCTCACCATCTGAGGAATTCTGGCGGAGAACAAAGTTGCCACATGCAACCAGCTACAAACCACAACACCGTTATAAAAGCTGCCTCTCTGATACTTACAAAAGTTTCCCTTCTTCAGCTCTGGCTCTCATCAATAAGCTTCTTGCTATTGAACCAGAGCATAGAGGATCAGCTTCTTCCGCTCTTGGAAGTGAGTTTTTCAGAACAGAACCTCTCCCTTGTGACCCCTCAAGCTTACCAAAGTATGCTCCGAGCAAAGAATTTGATGCCAAGCTGCGGAATGAAGAAGAAAGGAAGAGAAAAGCAGAAGCTGTGAAGGGATGGCATCCTGAATCAGTAAGAAGGGGCTCAAGAGACACCAAGGTAGTTCCTACTCCTGAATTCAGTGCTCAAGGAGATGTGACCATAAAGGTACACCCACTCGCGAAAAAAATTAACAAATACACCTCCCAAGAGGACAGCGGGCCTCCGAGAGTTGCGCAGAGTAGGTACGGCCACTCGACATCTATGGTGCACCCAAGCATTGCAGGTTCATGGGCCAAGCCTTCTGGAGCCACAAGAAATTGTGTAGAGTTAAAGACACAGAAATCT 1233 45.5 MQIGQGTYSSVYKARDLETGKIVALKKVRFVNKDPESVRFMAREIYILRKLDHPNVMKLEALVASRMSSNLYLVFEYMEHDLAGLVAAPGHKFTEAQIKCYVQQLLHGLEHCHSRGILHRDIKASNLLIDNNGVLKIADFGLATSFHPDRKQPLTSRVVTLWYRAPELLLGATQYGPAIDLWSCGCIVAELFAGKPIMPGRTEVEQIHKIFKLCGSPSEEFWRRTKLPHATSYKPQHRYKSCLSDTYKSFPSSALALINKLLAIEPEHRGSASSALGSEFFRTEPLPCDPSSLPKYAPSKEFDAKLRNEEERKRKAEAVKGWHPESVRRGSRDTKVVPTPEFSAQGDVTIKVHPLAKKINKYTSQEDSGPPRVAQSRYGHSTSMVHPSIAGSWAKPSGATRNCVELKTQKS 411
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 11884689 11889769 + Carg27454-RA Car09g01138 154875
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car09g01138 411 ProSitePatterns Serine/Threonine protein kinases active-site signature. 117 129 IPR008271 GO:0004672|GO:0006468
Car09g01138 411 MobiDBLite consensus disorder prediction 361 388 - -
Car09g01138 411 MobiDBLite consensus disorder prediction 361 398 - -
Car09g01138 411 ProSitePatterns Protein kinases ATP-binding region signature. 3 26 IPR017441 GO:0005524
Car09g01138 411 ProSiteProfiles Protein kinase domain profile. 1 281 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car09g01138 411 Pfam Protein kinase domain 2 281 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car09g01138 411 MobiDBLite consensus disorder prediction 314 339 - -
Car09g01138 411 Coils Coil 299 319 - -
Car09g01138 411 MobiDBLite consensus disorder prediction 314 335 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car09g01138 Car-Chr9:11884689 Car04g00518 Car-Chr4:2917917 0 dispersed
Car01g00780 Car-Chr1:4830404 Car09g01138 Car-Chr9:11884689 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
89109 PF00069 Pkinase 3.70E-71 CL0016 Car PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car09g01138 K08819 - csv:101208709 727.243