Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car10g00014 ATGGATGGGGAGCCAGCCGAGGCCTGGTACCTGATACCTGATACCTACGCTTCGCTTCGCTTTGCTTTTGAAGACACTGTACGCACTACCGTACCATTCATTTTCCTTTACCTTCCTTCTGTTATGGAAAAACACCATCATCTTCAACATCAGGATATCAAGGACGAACCCAAGGACCTCGATTTGGATCTCGGATCCGACGAGCCTGACCTTACCCCTCTCCCCCTCACCGTTACTTCCCGGGTACTGCACATGTTGGGAGACATCGCAGCAGGTCCAGCTTACAGGTTTTCCCAATGGCTTGAACTCGTCCGTAAACGTAGCGGCAAACATCGCGCTTCTGGCTTCCACAACCGCCCTCATCCACCCTTCGATATGCCTTTCGGTGCTGAGCAACTTTTCAATGAATCAATAAGTCTTCCAGCTCCCGAGCACTCAACTGAAACGAATTTGTGGGATAGACTCGCTAAAGCCTCGATGTTGGATATTGAGTCGAGCTCTTTTTCGTGGGATAGGCTACTGTCTCTTCACCGCACCGAACACAGTAGTAGCACTGAACAATCGGAAGATGAGATGAATAAAGCCCTTGAGGTCACTGTAAACTCTGGTGGAGTCGTTTTCTTTGCACTCTTCAATCAGCTTGTATATGACGATAATCTTCCAAAGGAAGCAGCTGCTGTGATAAAGATATCTTCTTCAAGAATGGCCACACAATCTGAACGCCTTGGCTATGAATTTGCCAAGTGGCTTGGGGTTCAAACTCCACAGGCTAGAGTTATTCATAATTCCAGCACGGAATGGCTCCAGATAAAAGAAGCTGCAGAGAAAGCACGAGATATTGCCTGTTTGGAAGGTGATGAGGTTGGTGAAATGACATGTTCTGAACTATTGGAAGCACTTGAATTTAGCAGATGCCTTTTCCTGATGAGCTATGTGCATGGATCTCCATTGTTAGAAATCTCAAGTGCATTTGAATCCCGAGAAAGGGCTGAAAAATTAGCCGCCGCTATTGGAAGGATCTTGCTATTGGACCTTGTCATCAGAAATGAAGATCGGCTCCCTTGTCGTCTTCTTCGTTGGCGTGGAAATTCTGCAAATTTGCTTTTGGCTGATAGAATGGCGTGTGCAAATTTGAATGCATTTGAGGAAGCCTTTGATTCTGCCATTAAACGGTACAGACCAAAAGTCATTTCAACGCTTCAAAAAGAAAGAAGGGGAACTTCAATGGACAATCGACCAAGTTCTAGTTCAGGGTTGGTTTCAGAGACCTCTGAACTTTCTGATAATGTTGAATCCCCAAAATCTAGTAACCTAAGTGTTAAAAGTCAAATATCAGATGAAGTAATGCTCTGTGATTTTAACATTGTGGCTATTGACTCTGGTGTTCCTCGTCGTCCTCCTGCTGGAAAACGTGCTAATGACCAGTCAATTTACCCAAAATTAGTTGAGTTGTTACTCAACAGTTCCGAGTTCTCCTCTAATCTATTGCATGACATTACGGGAGGGAAATTAGGATTCCCTTCATTAGCTGATGCCAACTCAACTTCTGGCATACAGCTTACAGATATGAGTTCTATTGTCCATGAATTTCGGTATGGGTTTCGTGCTGCTCTTAGGGACTTGCAAGGATTTCACATATTTTTGCTTACCCTTCACCAAAAGTTAGACAACTCATTACGAGCATTCATGAATATCATAAATAAATTTCCCTTGGGGGAATCCGATAAAGAGGACTCGGGGGTTCCCGAGTCCCATTTGCAGGCTTCTACCACTATTCATTGTTTATCTCCACGGGGTAAGGAACGAGTCTCCAGTGACGGTAATATAGATGTTACAGAGTCAGCTCCAAGATCGTCATCCTCAGGAAATAGAGAAAGCTCAGACTTATCTTCTCCCTTGTCACGAGATAGCTCACAAGGAAAGTTACACAGGGGAGGTGCAGAGCCCATTCATAGCCTTCGTTTGACTGCAAAGCTTCGAGACTTCCATAAATTTGCCAAGGTTGATGCTGAATCAAATAAAGAATTGGATATGTGGAATGAAGTGTTGAAGAATGAAGCTGTTAAACTCTGCCAGGAGAATAAATTTAATACTGGGTTTTTTGAGGGCAGCGATAGTCATGGAGTTGTGGATGCTTATGAATTGAAGGTGAGACTTGAGCACATTCTTGAAAGGATTGCACTGATATCTGAGGCTGCAAATACAGAAAGGCCTTCTTCAGTTACACCTGCCTTGTTTATAGGTGGTGCCTTGGCTGCAAGATCTGTTTACACTCTTCAGCATCTAGGAGTTACTCATATTTTATGTCTCTGCTCCAATGAAATTGGGCAGTCAGATTCTCAGTTTCCTGATCTATTTGAATACAAGAACTTTTCAATAAGTGACAATGAAGACTCAAACATCAGCAGTATCTTTGAGGAAGCTTCTGATTTTGTTGATGACGTTGAAAGAAAGGGTGGGAAGGTCCTGGTTCACTGTTTTGAAGGGAAAAGCAGAAGTGCCACATTAGTTCTTGCTTACTTGATGCTCAGAAAGAAATACACACTGCTAAAAGCATGGAATGCTTTGAAACGAGTTCACCGTCGAGCTCAGCCTAATGATGGGTTTGCTAAAACTTTGTTAGAATTAGATCGAAGAATACATGGAAAAGTTTCCATGGAGTGGCAGTCACGAAAACCAACTATGAAAGTCTGCCCAATTTGTGGGAAAAATGCTGGACTGAGCAGTAGCTCACTGAAACTTCATCTGCAAAAATCACACAAGAAGCTATCATCTGGGAGCGTAGACAGTGCAATGACCATGGAAATACAGAAAGCACTAACAGCTCTGAAAATCAGTCGTGGCGGAAGCGTGAGCCCAACCCAGAGGCAATCTCTTCTGATCTTAGATGAATAG 2895 43.56 MDGEPAEAWYLIPDTYASLRFAFEDTVRTTVPFIFLYLPSVMEKHHHLQHQDIKDEPKDLDLDLGSDEPDLTPLPLTVTSRVLHMLGDIAAGPAYRFSQWLELVRKRSGKHRASGFHNRPHPPFDMPFGAEQLFNESISLPAPEHSTETNLWDRLAKASMLDIESSSFSWDRLLSLHRTEHSSSTEQSEDEMNKALEVTVNSGGVVFFALFNQLVYDDNLPKEAAAVIKISSSRMATQSERLGYEFAKWLGVQTPQARVIHNSSTEWLQIKEAAEKARDIACLEGDEVGEMTCSELLEALEFSRCLFLMSYVHGSPLLEISSAFESRERAEKLAAAIGRILLLDLVIRNEDRLPCRLLRWRGNSANLLLADRMACANLNAFEEAFDSAIKRYRPKVISTLQKERRGTSMDNRPSSSSGLVSETSELSDNVESPKSSNLSVKSQISDEVMLCDFNIVAIDSGVPRRPPAGKRANDQSIYPKLVELLLNSSEFSSNLLHDITGGKLGFPSLADANSTSGIQLTDMSSIVHEFRYGFRAALRDLQGFHIFLLTLHQKLDNSLRAFMNIINKFPLGESDKEDSGVPESHLQASTTIHCLSPRGKERVSSDGNIDVTESAPRSSSSGNRESSDLSSPLSRDSSQGKLHRGGAEPIHSLRLTAKLRDFHKFAKVDAESNKELDMWNEVLKNEAVKLCQENKFNTGFFEGSDSHGVVDAYELKVRLEHILERIALISEAANTERPSSVTPALFIGGALAARSVYTLQHLGVTHILCLCSNEIGQSDSQFPDLFEYKNFSISDNEDSNISSIFEEASDFVDDVERKGGKVLVHCFEGKSRSATLVLAYLMLRKKYTLLKAWNALKRVHRRAQPNDGFAKTLLELDRRIHGKVSMEWQSRKPTMKVCPICGKNAGLSSSSLKLHLQKSHKKLSSGSVDSAMTMEIQKALTALKISRGGSVSPTQRQSLLILDE 964
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 76162 84787 - Carg10246-RA Car10g00014 154916
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car10g00014 964 ProSiteProfiles Dual specificity protein phosphatase domain profile. 737 882 IPR020422 GO:0006470|GO:0008138
Car10g00014 964 ProSitePatterns Tyrosine specific protein phosphatases active site. 824 834 IPR016130 GO:0016311|GO:0016791
Car10g00014 964 MobiDBLite consensus disorder prediction 410 438 - -
Car10g00014 964 Pfam Actin-fragmin kinase, catalytic 148 462 IPR015275 -
Car10g00014 964 Pfam Dual specificity phosphatase, catalytic domain 753 878 IPR000340 GO:0008138|GO:0016311
Car10g00014 964 MobiDBLite consensus disorder prediction 400 438 - -
Car10g00014 964 MobiDBLite consensus disorder prediction 608 638 - -
Car10g00014 964 MobiDBLite consensus disorder prediction 574 647 - -
Car10g00014 964 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 802 858 IPR000387 GO:0016311|GO:0016791
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car04g01803 Car-Chr4:10336560 Car10g00014 Car-Chr10:76162 7.77E-19 dispersed
Car10g00014 Car-Chr10:76162 Car18g00686 Car-Chr18:8145204 8.40E-20 dispersed
Car10g00014 Car-Chr10:76162 Car04g00215 Car-Chr4:1194765 4.48E-20 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car10g00014 K14165 - csv:101220184 1644.79