Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car10g00018 ATGGCTCTGTCGAAAGATGGGCAGCGAAATCCTCTGGTGCCAAGCTTTGTGTATTCTGCTAATTGGGGGATTTCCCAAACAGTGGTTAGGACGACGCCGGCATGGAGTTACGGCAGGAGCTTCCCAATTGAAGCTCCGAAAGAGAAGATAAAGATGTATTCACCGCCCTTCTACGCCGCTTGTACAGTAGGCGGCATTTTGAGTTGTGGACTCACCCACATGACTGTCACCCCCCTCGACCTCGTCAAGTGCAATATGCAGATCGACCCTGCAAAGTACAAGAACATCTCGTCTGGTTTTGGAATTCTGCTAAAGGAGCAGGGAGTGAGAGGGTTCTTCCGGGGTTGGGTGCCAACGTTGCTTGGTTACAGTGCTCAGGGGGCGTGCAAGTTTGGATTTTACGAGTTCTTCAAGAAGTACTATTCTGATATAGTTGGAGCAGAGAATGCAGCCAAGTACAAAACTTTCATATACCTTGCTGGCTCAGCATCTGCAGAAGTAATTGCCGATGTCGCTCTCTGCCCCATGGAGGCCGTCAAAGTTCGTGTCCAAACGCAACCTGGTTTTGCTCGGGGGTTGTCAGATGGGCTCCCAAAGTTTGTCAAGTCTGAGGGTGTTCTTGGGCTCTATAAAGGTCTGGTTCCTCTTTGGGGACGTCAGATTCCGTATACCATGATGAAATTTGCTTCTTTCGAAACAATTGTTGAGATGCTGTACAAGTATGCCATCCCAAGGCCAAAAGAACAGTGTAGCAAATCTCTGCAGCTTGGAGTGAGCTTTGCCGGTGGATATGTGGCCGGCGTCCTCTGTGCCGTAGTCTCACACCCGGCTGATAATCTCGTCTCTTTTCTCAACAACGCAAAGGGCGCAACCGCCGGGGATGCAGTGAGGCAGCTGGGTTTATGGGGTCTGTTCACTCGAGGCCTTCCGCTTCGGATTGTTATGATTGGAACTCTTACCGGGTCTCAATGGGGAATATATGACGCATTCAAAGTTTTCGTTGGACTGCCAACAACGGGTGGAGCTGCTCCTGCTCCTGCCGCTAACAAGTGA 1053 50.52 MALSKDGQRNPLVPSFVYSANWGISQTVVRTTPAWSYGRSFPIEAPKEKIKMYSPPFYAACTVGGILSCGLTHMTVTPLDLVKCNMQIDPAKYKNISSGFGILLKEQGVRGFFRGWVPTLLGYSAQGACKFGFYEFFKKYYSDIVGAENAAKYKTFIYLAGSASAEVIADVALCPMEAVKVRVQTQPGFARGLSDGLPKFVKSEGVLGLYKGLVPLWGRQIPYTMMKFASFETIVEMLYKYAIPRPKEQCSKSLQLGVSFAGGYVAGVLCAVVSHPADNLVSFLNNAKGATAGDAVRQLGLWGLFTRGLPLRIVMIGTLTGSQWGIYDAFKVFVGLPTTGGAAPAPAANK 350
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 95616 97319 + Carg10250-RA Car10g00018 154920
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car10g00018 350 ProSiteProfiles Solute carrier (Solcar) repeat profile. 56 140 IPR018108 -
Car10g00018 350 Pfam Mitochondrial carrier protein 59 142 IPR018108 -
Car10g00018 350 Pfam Mitochondrial carrier protein 154 241 IPR018108 -
Car10g00018 350 ProSiteProfiles Solute carrier (Solcar) repeat profile. 153 237 IPR018108 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car10g00018 Car11g00008 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car10g00018 Car-Chr10:95616 Car15g00765 Car-Chr15:4337829 0 dispersed
Car10g00018 Car-Chr10:95616 Car11g00008 Car-Chr11:42978 1.97E-44 wgd
Car10g00018 Car-Chr10:95616 Car11g01274 Car-Chr11:10624424 0 wgd
Car10g00018 Car-Chr10:95616 Car14g00690 Car-Chr14:3799873 1.52E-11 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car10g00018 K15102 - csv:101220423 600.127