Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car10g00053 ATGGCCGCCACCAACACCAATGTCGCCACCGGCGTCGACGACCGCGTCTTGGCCACTGCGCAGCAGATCGTCAAGAGCCTCAATACCCCTAAAGAGGTTCGTGAGGACATGCTCTTGATTCTCTCCAATTTCGACAATCGCCTTTCCAGTATCGGTAGCATGATCAACAGTGACAACAACTCCAACACCGAGAACGATAGGTTGGACGCCGCCGAGAAGGTGATTCTACGTTGGGATCCTAATTCAGATGTACCGAGACCGTCGCTTAATTGGGAGGACTCGCCGGACGAGGCGGCTGAATATTTATCTGCGGTGGATGATATACTCCGGCTAGTTGAAGACCTGTCAATTGGGTCCGAGTCGACCAAGATCGTTGCCCGGGCGGAAAACGCGATCCAAATGGCTATGTGTCGGCTCGAGAGCGAATTTCGCCATATCCTGATCCAGAGCACAGTTCCTCTCGACGCCGATCGGCTCTACGGCTCGATCCGAAGAGTTCACCTCTCATTTGCGTCCCATTACAGTGAAATTGACGACGAATTCGAGAGTTTCGGCGAGGAAAGTCGCAATTCCGGGCGATTCCATGAGCGAGGTGCGACAATTGGAGAAGATTCTTGGGTCGATTTGATCCATCCCGATGCGGCTGTTGATCTCTCGGAAATTGCGGACCGTATGATTCGCTCTGGCTACGAAAAGGAGTGTGTTCAAGTCTACAGCACCGTTCGTCGCGATGCTTTGGACGAGTGTTTGGCAATTCTTGGCGTCGAACGGCTCAGCATTGAGGAGGTTCAGAAAAGTGACTGGAAATTTCTAGACGAGAAGATGAAGAAATGGATCCAGGCCGTCAAAATTACTGTCCGGTTGATTTTGGTCGGTGAGAAGAGGCTCTGTGACCAGATTTTTAGTGGCGCCAATGAATCCCAGGAGATTTGTTTTAACGAAACAGCAAAAGGGTGTGTAATGCAGCTGCTAAATTTCGGTGAGGCAGTGGCTATTGGGAAGAGGTCACCGGAGAAGCTGTTCCGAATCTTGGATATGTATGACGCTCTGGCTGGCGTTTTGCCACACTTGGAAGCCATGGTTTCCGATGAGTTTCTTATCAGTGAAGTACACGGAGTATTGTCTGGACTGGGAGAAGCAGCCACGGGAACTTTTGTAGAGTTTGAGAACGCTATTCTTAGCGAAAATTCAAAGAAAGCAATGCAAAATGCAGATATTCACCCGCTCATTCGATATGTAATGAATTATGTTAGGCTGCTGGTTGATTACAGTAAGACAATGAACTCTCTTTTAGAAGATGAGGAAGAACAAGACATGCCAAATGAGAAGGATAACGATGATATACTGCAGTTGGAAAGCACGTCGCCTTTGGCTCGTCGACTGTTCATGTTGTTATCGTCTCTGGAGTCCAATCTTGTTGAAAAATCTAAATTTTATGAGGATGTTTCTATGCAGTTCATATTCCTAATGAACAATATACTGTACATAGTGAAAAAGGTGAAAGATTCTGAGCTTGCCCAGCTGCTTGGCGATAACTGGCTTCGCAGGCGTAGCGGCCAAATTCGCCAATACGAAACTAGTTACCTTAGAGCCTCTTGGAGCAAAGTCTTGTCCTGCTTAAAGGATGAAGGCATTGGTGGGAGCCCAAGCAACGCCTCCAAGGTAGCTTTGAAGGAGAAGTTCAAGAATTTCAATGCAGGTTTTGAGGAAATCTGCAGGGTTCAAACAGCTTGGAAGGTGTCGGATACTCAACTGCGCGATGAGCTGATCATATCGGTTTCGGAGAAGGTGATTCCTGCGTACCGCTCGTTCTTAGGAAGGTTTAGAAATCAGTTGGAGAGCGGAAGGCATTCTGGGAAGTACATAAAGTACACGCCAGAGGATTTAGAGAACTCTCTATCAGATTTGTTTGAAGGATCACTTGCTGTATCACATCACTTGAGAAGAAAGAGTACTTGA 1959 47.58 MAATNTNVATGVDDRVLATAQQIVKSLNTPKEVREDMLLILSNFDNRLSSIGSMINSDNNSNTENDRLDAAEKVILRWDPNSDVPRPSLNWEDSPDEAAEYLSAVDDILRLVEDLSIGSESTKIVARAENAIQMAMCRLESEFRHILIQSTVPLDADRLYGSIRRVHLSFASHYSEIDDEFESFGEESRNSGRFHERGATIGEDSWVDLIHPDAAVDLSEIADRMIRSGYEKECVQVYSTVRRDALDECLAILGVERLSIEEVQKSDWKFLDEKMKKWIQAVKITVRLILVGEKRLCDQIFSGANESQEICFNETAKGCVMQLLNFGEAVAIGKRSPEKLFRILDMYDALAGVLPHLEAMVSDEFLISEVHGVLSGLGEAATGTFVEFENAILSENSKKAMQNADIHPLIRYVMNYVRLLVDYSKTMNSLLEDEEEQDMPNEKDNDDILQLESTSPLARRLFMLLSSLESNLVEKSKFYEDVSMQFIFLMNNILYIVKKVKDSELAQLLGDNWLRRRSGQIRQYETSYLRASWSKVLSCLKDEGIGGSPSNASKVALKEKFKNFNAGFEEICRVQTAWKVSDTQLRDELIISVSEKVIPAYRSFLGRFRNQLESGRHSGKYIKYTPEDLENSLSDLFEGSLAVSHHLRRKST 652
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 236582 238540 + Carg10285-RA Car10g00053 154955
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car10g00053 652 Pfam Exo70 exocyst complex subunit 276 635 IPR046364 GO:0000145|GO:0005546|GO:0006887
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car10g00053 Car13g00651 CCT
Car10g00053 Car18g00228 CCT
Car10g00053 Car11g00032 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car10g00053 Car-Chr10:236582 Car14g01052 Car-Chr14:9233012 2.30E-151 dispersed
Car18g00872 Car-Chr18:9691630 Car10g00053 Car-Chr10:236582 4.63E-116 dispersed
Car10g00053 Car-Chr10:236582 Car11g00032 Car-Chr11:171293 0 wgd
Car10g00053 Car-Chr10:236582 Car13g00651 Car-Chr13:8066683 0 wgd
Car10g00053 Car-Chr10:236582 Car18g00228 Car-Chr18:1303178 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car10g00053 K07195 - csv:101205970 1128.24