Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car10g00068 ATTCGAATCTCCAAGACCCCAATCGGGTCGCAGTGGCTCGTAGCCGGGTTTTGCAACTTGGAGATCACCAGAGCAATGAAGAAAGCAACAACAGGCAGCATCGTTCTTCTTTTAGCTTTGCTTTCTCTTCAAGACTTTGTTCGTTTTGCATTGGCGCTACCTCCTTCAGAGAGTAATCAGGACGAGGAGCAATCTGCAACTACGAGACCTCTCGAGCAAGACAAAGAGCATTTTGAGGAAGTTCATTGTTCCAGAGAAAGAAGTAGGACAGCCTGGAATATTCTTGAGGAGCATTTGCTGCCGTTTGTTGAGAAGGAGAATTATCAGGTTTCAACCAAGTGTAGGCTTCATCCAAACAATGATCTCTACAGAGATCAGGAGCAGCACAAGATTCATTTTGATATAAATCATTGGCAGTGTGGATACTGTCGCAAAAGCTTTCGTGCTGAAAAATTTCTTGATAAGCATTTCGACAACAGACATTACGATCTTCTGAATGTTAGTCACGGGAAGTGCTTAGCTGATTTATGTGGGGCTTTACATTGTGACCTAAAGATGGATATCAAGTCACGTAAATCTAAATGCAAGCCTGCAGCTGCAGCTAGGAACAAGCATTTATGTGAGAGTCTTGCTGATACTTGTTTTCCAATTAATGAGGGACCATCAGCAAGCCGTCTTCATGAGTTGTTTCTTCACCAATTCTGTGGAGCTCATTCTTGCACTGAGAAACAAAAGCCATTTTCTAGAGGAGCGGAGAGGCAACCAGGCATCTTTTACATGGCATCTTCAATACTGATTTTGATGTTGCTACCGATTTTCTATGTCATTGTCTATTTGCACCGCAGAGAATCGAGAAACGGAATCGAAGTGCTTAGAAGAATCACAAAGTCTGGACGTAAAAGCAAACCATTGTAA 915 42.62 IRISKTPIGSQWLVAGFCNLEITRAMKKATTGSIVLLLALLSLQDFVRFALALPPSESNQDEEQSATTRPLEQDKEHFEEVHCSRERSRTAWNILEEHLLPFVEKENYQVSTKCRLHPNNDLYRDQEQHKIHFDINHWQCGYCRKSFRAEKFLDKHFDNRHYDLLNVSHGKCLADLCGALHCDLKMDIKSRKSKCKPAAAARNKHLCESLADTCFPINEGPSASRLHELFLHQFCGAHSCTEKQKPFSRGAERQPGIFYMASSILILMLLPIFYVIVYLHRRESRNGIEVLRRITKSGRKSKPL 304
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 309297 315044 + Carg10300-RA Car10g00068 154970
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car10g00068 304 ProSitePatterns Zinc finger C2H2 type domain signature. 140 161 IPR013087 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car10g00068 Car-Chr10:309297 Car11g01334 Car-Chr11:10962216 1.35E-115 wgd
Car10g00068 Car-Chr10:309297 Car14g00633 Car-Chr14:3531421 2.76E-111 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
4127 None None None None Car TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car10g00068 - - csv:101218367 510.76