Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car10g00073 ATGAAAGTGGGCTCCAGCCATCCAATTGTGATCCCGTTTTTCGTTGGAGCCACGCCTATAAAGAAGAAGACCAAGTCTAACACTACTGCCAATTCTTTTGCTTGCCGGCAAACTCCCTTCGCTCGCAGCCAGAAAATGGCTTTACCTTCCTCCAAACTCCTTCCATTCTTAGTTTTTCTCTCCGTCCTTTTCCATGTCCATGCCCGACTGAACATTGATCCTTCAGATCTCAGAGCCTTTTCTATCATCAAGAATAACTTGGGTATTGACGGTCAACTCTCCCCCTACCCATGCGACAACGCCGGTGTATTCTGCGAGAGACGGCTCTCCAGCAACGGCACTTACGTTTTGAGGGTCACCAGGCTCATTTTCAAGTCCAAAGATCTTGCTGGTTCTCTTCCTCCGGCTATCGGCCGGCTATCGGAGCTGAAAGAGCTTACGATTTCTAATAATCAACTCGTTGACCAAGTGCCTGCCCAAATCGTCGACTGCCGGAAATTGGAAGTTCTCGATCTCCAAAACAACCACTTTTCTGGAAAAGTTCCGTCCGGATTGTCCTCGTTGACTCGCCTTCGGGTCATCGATCTTTCGTTCAATAAGTTCTCGGGGAGTTTGGATTTCTTGAAGTATTTTCCCCATTTGGAAAGTCTCTCCATAGCCAACAATTACTTCACGGGGAGAATCCCAGCTTCAATTCGTTCTTTTCGCAATCTTCGAGTCTTCAACTTCTCTGGAAACCCCCTTCTCGAAAGTTCATACCCCATCGTGAAAGGCGTTGAGTTCTACTCAACTACCGAAGTTCCCAAGCGTTATAAGTTATTAGCCGAGAAGTCCAGTACGAAAGGCAATCACAGTGCCGCCGCCACAGCGCCAACTTCGAGTGCTCAAGCTCCATCTCCTGCGGCCTCACCTCCTCATAGGAACCGGAAGAATAAAGCAAAGATAGTACTTGCTTGGATTCTTGGGTTCCTCGCTGGAGCAATTGCTGGAAGTTTGTCAGGGTTTATCTTTTCACTAATGGTTAAACTCGTCATAGCAGTTATAAAAGGTGGAAGCAAGAATTCGGGACCCTCAATATTTGCACCTAAGCTGATAAAACGAGAGGATCTGGCTTTTCTAGAGAAAGACGATGCACTAGCATCGCTCGAACTGATTGGAAAAGGTGGATGTGGAGAAGTTTACAAGGCGGAATTACCAGAAAAAAGCGGAAAAATGTTTGCGATTAAGAAGATAACTCAGCCCCCAAAGGACGCGGCCGAGTTAGCTGACGAGGATAGCAGGTTTATGAGCAAGAAAATGCGTCAGATCAAGTCAGAGATCAGAACTGTGGGTGAAATCCGGCATCGTAATCTTCTTCCTCTTGTGGCCCATGTCCCCCGTCCTGATTGCCATTACCTTGTGTACGAGTTGATGAAGAATGGCAGCTTGCAAGATATATTGAATCAGGTTTCGGGAGGAGTGAAAGAACTAGATTGGCTTACTCGGCATAACATCGCTCTCGGAGTGGCATCTGGGCTGGAGTATCTTCACATGAACCATACCCCGCGTATTATTCACAGGGATCTGAAGCCTGCAAATGTTTTGCTTGATGACGACATGGAAGCTCGAATTGCTGATTTTGGGCTGGCAAAAGCAATGCCAGATGCCCAAACTCACATGACAGCTTCAAATGTTGCAGGTACCGTAGGATACATCGCACCAGAGTATCATCAGACCTTGAAGTTCACTGATAAGTGCGATATATACGGCTTTGGGGTTCTGCTTGGTGTCTTGGTGATCGGTAAACTTCCATCTGATGAGTTTTTCCAGGACACGGATGAGATGAGTTTGGTTAAGTGGATGAAGAATGTGATGACTTCGGATAATCCTAGGAGAGCCATTGATCCGAAGCTCCTGGGAAATGGCTGGGAGGAGCAAATGCTCTTGGCCCTCAAAATTGCCTGCTTTTGCACTATGGATAATCCAAAAGAGAGGCCTAACAGTAAGGATGTCAGATGCATGCTGTCACAGATCAAGCACGATGTACCTGAAACTTCCTCTCTAAACGTCTAA 2052 46.78 MKVGSSHPIVIPFFVGATPIKKKTKSNTTANSFACRQTPFARSQKMALPSSKLLPFLVFLSVLFHVHARLNIDPSDLRAFSIIKNNLGIDGQLSPYPCDNAGVFCERRLSSNGTYVLRVTRLIFKSKDLAGSLPPAIGRLSELKELTISNNQLVDQVPAQIVDCRKLEVLDLQNNHFSGKVPSGLSSLTRLRVIDLSFNKFSGSLDFLKYFPHLESLSIANNYFTGRIPASIRSFRNLRVFNFSGNPLLESSYPIVKGVEFYSTTEVPKRYKLLAEKSSTKGNHSAAATAPTSSAQAPSPAASPPHRNRKNKAKIVLAWILGFLAGAIAGSLSGFIFSLMVKLVIAVIKGGSKNSGPSIFAPKLIKREDLAFLEKDDALASLELIGKGGCGEVYKAELPEKSGKMFAIKKITQPPKDAAELADEDSRFMSKKMRQIKSEIRTVGEIRHRNLLPLVAHVPRPDCHYLVYELMKNGSLQDILNQVSGGVKELDWLTRHNIALGVASGLEYLHMNHTPRIIHRDLKPANVLLDDDMEARIADFGLAKAMPDAQTHMTASNVAGTVGYIAPEYHQTLKFTDKCDIYGFGVLLGVLVIGKLPSDEFFQDTDEMSLVKWMKNVMTSDNPRRAIDPKLLGNGWEEQMLLALKIACFCTMDNPKERPNSKDVRCMLSQIKHDVPETSSLNV 683
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 327999 330050 - Carg10305-RA Car10g00073 154975
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car10g00073 683 Coils Coil 681 683 - -
Car10g00073 683 ProSitePatterns Serine/Threonine protein kinases active-site signature. 517 529 IPR008271 GO:0004672|GO:0006468
Car10g00073 683 MobiDBLite consensus disorder prediction 278 308 - -
Car10g00073 683 Pfam Protein kinase domain 382 662 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car10g00073 683 MobiDBLite consensus disorder prediction 278 301 - -
Car10g00073 683 ProSiteProfiles Protein kinase domain profile. 379 676 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car10g00073 683 Pfam Leucine rich repeat 142 201 IPR001611 GO:0005515
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car10g00073 Car11g00053 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car06g01449 Car-Chr6:10317588 Car10g00073 Car-Chr10:327999 5.23E-51 dispersed
Car10g00073 Car-Chr10:327999 Car02g01469 Car-Chr2:9585363 1.26E-08 dispersed
Car10g00073 Car-Chr10:327999 Car11g00053 Car-Chr11:300719 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
89110 PF00069 Pkinase 6.20E-42 CL0016 Car PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car10g00073 - - csv:101220500 1071.61