Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car10g00081 ATGGAAGCTGGGTGTAGATTCTACTCTGCTACGGATGAGTTCAGATTGGAAGGCAAATGGTTGGTTGATCCCAAACATCTCTTCGTCGGACCTAGAATTGGAGAGGGAGCTCATGCCAAAGTTTACGAGGGCAAGTATAAGAACCAGACTGTTGCTATCAAAATTGTTCATAAAGGGGAAACAGCTGAAGAGGTTGTAAAGAAAGAAGCTCGGTTTGCTCGGGAGGTTGCAATGTTGTCTAAAGTGCAACATAAAAATCTTGTCAAGTTTATTGGTGCCTGCAAGGAGCCTGTAATGGTGATAGTAACGGAGCTTTTATTAGGAGGGACCTTACGAAAGTACCTGCTCAATATGCGTCCACGGTGCTTGGACACACGCGTGGCTGTTGGTTTTGCGCTTGATATTGCTCGTGCTATGGAATGCCTTCACTCCCATGGCATCATTCATCGTGATCTGAAACCTGAGAACCTTCTGTTGACTGCAGATCACAAGACAGTTAAATTAGCAGATTTTGGCTTGGCAAGAGAAGAGTCGTTGACAGAGATGATGACTGCGGAGACGGGGACCTACCGATGGATGGCTCCAGAGTTGTATAGCACTGTGACACTAAGGCAAGGGGAGAAAAAACATTACAACCATAAAGTGGATGCCTATAGCTTTGCAATTGTGTTATGGGAACTGCTACACAACAAGTTGCCATTTGAAGGCATGTCAAATCTTCAGGCAGCATATGCCGCTGCTTTTAAGAATGTAAGGCCTAGCGCAGAGAATCTTCCTGAGGAACTGGCTATGGTTCTAACATCATGCTGGCAGGAGGATGCAAATGCTCGTCCTAATTTCTCCCAAATTATTCAAATGCTACTCAATTACCTTTACACTATTTCACCCCCCGAGCCGATGATTGCTTCCCGATTTTTCTCTTCTGAGAACACGGTGTTTCCTCCCGAGTCTCCCGGAACAAGTTCACTGATGGCAGTCCGTGATGATTCAGGGGACACTCCGAAAGCTAAAACGGAAAATAATCCCAGAGGTTGTTTCTCCTGCTCCTATGACTGTTTCTAA 1062 45.48 MEAGCRFYSATDEFRLEGKWLVDPKHLFVGPRIGEGAHAKVYEGKYKNQTVAIKIVHKGETAEEVVKKEARFAREVAMLSKVQHKNLVKFIGACKEPVMVIVTELLLGGTLRKYLLNMRPRCLDTRVAVGFALDIARAMECLHSHGIIHRDLKPENLLLTADHKTVKLADFGLAREESLTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNHKVDAYSFAIVLWELLHNKLPFEGMSNLQAAYAAAFKNVRPSAENLPEELAMVLTSCWQEDANARPNFSQIIQMLLNYLYTISPPEPMIASRFFSSENTVFPPESPGTSSLMAVRDDSGDTPKAKTENNPRGCFSCSYDCF 353
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 365566 368611 - Carg10313-RA Car10g00081 154983
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car10g00081 353 SMART serkin_6 27 291 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car10g00081 353 Pfam Protein tyrosine and serine/threonine kinase 31 287 IPR001245 GO:0004672|GO:0006468
Car10g00081 353 ProSiteProfiles Protein kinase domain profile. 27 291 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car10g00081 353 CDD STKc_MAP3K-like 33 287 - -
Car10g00081 353 Gene3D Transferase(Phosphotransferase) domain 1 108 298 - -
Car10g00081 353 Gene3D Phosphorylase Kinase; domain 1 15 106 - -
Car10g00081 353 ProSitePatterns Protein kinases ATP-binding region signature. 33 54 IPR017441 GO:0005524
Car10g00081 353 PANTHER SERINE/THREONINE-PROTEIN KINASE HT1-LIKE 1 328 - -
Car10g00081 353 MobiDBLite consensus disorder prediction 314 339 - -
Car10g00081 353 PANTHER SERINE-THREONINE PROTEIN KINASE 1 328 - -
Car10g00081 353 SUPERFAMILY Protein kinase-like (PK-like) 19 315 IPR011009 -
Car10g00081 353 PRINTS Tyrosine kinase catalytic domain signature 103 116 IPR001245 GO:0004672|GO:0006468
Car10g00081 353 PRINTS Tyrosine kinase catalytic domain signature 141 159 IPR001245 GO:0004672|GO:0006468
Car10g00081 353 PRINTS Tyrosine kinase catalytic domain signature 215 237 IPR001245 GO:0004672|GO:0006468
Car10g00081 353 PRINTS Tyrosine kinase catalytic domain signature 258 280 IPR001245 GO:0004672|GO:0006468
Car10g00081 353 ProSitePatterns Serine/Threonine protein kinases active-site signature. 147 159 IPR008271 GO:0004672|GO:0006468
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car10g00081 Car11g00060 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car03g00699 Car-Chr3:6108304 Car10g00081 Car-Chr10:365566 1.97E-103 dispersed
Car06g00170 Car-Chr6:1018365 Car10g00081 Car-Chr10:365566 9.72E-153 dispersed
Car07g00440 Car-Chr7:2231481 Car10g00081 Car-Chr10:365566 3.08E-102 dispersed
Car10g00081 Car-Chr10:365566 Car14g00012 Car-Chr14:73289 1.25E-145 dispersed
Car10g00081 Car-Chr10:365566 Car11g00060 Car-Chr11:334803 9.19E-100 wgd
Car10g00081 Car-Chr10:365566 Car14g00615 Car-Chr14:3451017 0 wgd
Car10g00081 Car-Chr10:365566 Car04g02582 Car-Chr4:20304173 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
89111 PF07714 PK_Tyr_Ser-Thr 1.80E-58 CL0016 Car PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car10g00081 - - csv:101223021 684.871