Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car10g00084 ATGGAACGACAACGGCGGCGGCGACGACGACGATCTCTGTTACTTCTACTTCAGCTCTGTATCTTCTTCATCCTTTTCTTTCCCTCTTACGCAGTTGATTTCATCTTCAATTCGTTCACAAACGGCTCGAATGGCACCGACATCATTCTCATTAGCGACGCGAGGTTCGATTCCCCTGTAATTCGTCTTAATAATGACTCAAACCCAAATTCAATCGGGCGAGCTTTCTATCACACGAAGCTGATTATGAAACCCACTTCGAATTCGACTACGATCTCTTCTTTTTCAACTACTTTCGTGTTTTCAATTTTGCTGGAAGTCGCTACTAGTCCAGGCTTCGGTATGGCCTTCGTTCTTTCCAATTCCACTTCCCCTCCCGACGTCATAGCGGGTCAATACTTCGGTCTCTTCACAAATTCCACTACCCATGTTGTTGCTCCGCTTCTCGCCGTTGAATTCGACACCGGTCGAAACACGGAGTTCAACGATCCCGATGATAGCCATATCGGAATCGATTTGAACAGTATGTTGTCGATAAAAACACAGACCGCTGGGTATTTTGACCCTAATGGAATTTTTGTTCCAATTCAGATGAGAAATGGGCAGAACCTTCGCGCTTGGATCGAGTTTGATGGGTCCAATTTCGAAATCAATGTCACGATTGCCCCAATTGGAATTCCTCGTCCATCCAAACCCACTTTGAGTTTTAGGGATCCTGAAATAGCAAATTATGTATCGAATGAAATGTTTGTGGGATTTTCAGCGTCGAAGACAAAATGGGTTGAGGCGCAGAGGATTTTGGCTTGGAGTTTTAGTGACACAGGTGTTGCTAGAGAGATTAACAACACGAATTTCCCTGTGTTTATGAGAGCATCACCACCGTCTTCCTTGTCGCCGGGATCTGTTGCCGGTATTGTAATCGGCAGTGTTGTGTTTGTGATCTTAATTTCTGGATTTGTGGGGTTTTGGTATTGGCGAAAGAACAGAGCAAGTGAAGAAGATGAAATTGAGGATTGGGAGCTCGAATATTGGCCTCACAGATTCTCTAATGAGGAGCTTTCACAGGCCACTGATGAATTTTCGGATAAGAATCTGTTGGGTTCCGGTGGATTTGGAAGAGTATTCAAAGGAACTTTACCAAACAACACGGAAATCGCCGTAAAGTGTGTAAATCACGATTCAAAACAGGGGTTAAAGGAATTCATGGCGGAAATCTCGAGCATGGGTAGGCTTCAACATAAAAATCTAGTCCAAATGCGAGGATGGTGTCGTAAAGGCAATGAATTAATGTTGGTATACGATTACATGCCGAATGGAAGCCTTAATCGGTGGATTTTCGACAAACCCACAACGCTACTCGGCTGGAAACAGCGCCGACGTGTGCTCGCTGACGTTGCAGAGGGTTTGAACTATCTCCACCATGGTTGGGACCAGGTGGTGATTCACAGAGACATAAAATCAAGCAACGTGTTAATGGATTCGGAAATGAGAGGCAGACTGGGCGATTTTGGGCTGGCAAAACTGTACCAACACGGCGAGACTCCAAATACCACCCGCGTCGTTGGGACCTTGGGGTATTTAGCGCCGGAGATTGCAACGGTGGCTACTCCGACGGCGGCCAGCGATGTGTATAGTTTTGGGGTTGTGATTCTTGAAGTAGCATGTGGGCGGCGACCGATTGAGATGGCAGTGGAGGAAGAAGAAATGGTACTTATAGATTGGGTGAAGGATCTTTACTCCGCCGGACGGTTGATTGCGGCGGCGGACTTGAGAATCAGAGAGGAATATGAAACAGAGGAGATGGAGTTGATGTTGAAGCTTGGTTTAGCTTGTTGTCATCCGGACCCTGAACGGCGGCCGACAATGAGGGAGGTTGTGGCTGTTTTGATTGGAGAACAACAGGCAGCTGAGTCAGTGGAACTTCTGTCGGGATTGTCCGGCGGCGCTGTTGATGGCAGCCCAGAAGTTTGA 1971 46.88 MERQRRRRRRRSLLLLLQLCIFFILFFPSYAVDFIFNSFTNGSNGTDIILISDARFDSPVIRLNNDSNPNSIGRAFYHTKLIMKPTSNSTTISSFSTTFVFSILLEVATSPGFGMAFVLSNSTSPPDVIAGQYFGLFTNSTTHVVAPLLAVEFDTGRNTEFNDPDDSHIGIDLNSMLSIKTQTAGYFDPNGIFVPIQMRNGQNLRAWIEFDGSNFEINVTIAPIGIPRPSKPTLSFRDPEIANYVSNEMFVGFSASKTKWVEAQRILAWSFSDTGVAREINNTNFPVFMRASPPSSLSPGSVAGIVIGSVVFVILISGFVGFWYWRKNRASEEDEIEDWELEYWPHRFSNEELSQATDEFSDKNLLGSGGFGRVFKGTLPNNTEIAVKCVNHDSKQGLKEFMAEISSMGRLQHKNLVQMRGWCRKGNELMLVYDYMPNGSLNRWIFDKPTTLLGWKQRRRVLADVAEGLNYLHHGWDQVVIHRDIKSSNVLMDSEMRGRLGDFGLAKLYQHGETPNTTRVVGTLGYLAPEIATVATPTAASDVYSFGVVILEVACGRRPIEMAVEEEEMVLIDWVKDLYSAGRLIAAADLRIREEYETEEMELMLKLGLACCHPDPERRPTMREVVAVLIGEQQAAESVELLSGLSGGAVDGSPEV 656
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 380276 382246 + Carg10316-RA Car10g00084 154986
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car10g00084 656 ProSitePatterns Serine/Threonine protein kinases active-site signature. 480 492 IPR008271 GO:0004672|GO:0006468
Car10g00084 656 Pfam Legume lectin domain 32 284 IPR001220 GO:0030246
Car10g00084 656 ProSitePatterns Legume lectins beta-chain signature. 149 155 IPR019825 -
Car10g00084 656 ProSiteProfiles Protein kinase domain profile. 360 642 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car10g00084 656 ProSitePatterns Protein kinases ATP-binding region signature. 366 388 IPR017441 GO:0005524
Car10g00084 656 Pfam Protein kinase domain 361 626 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car10g00084 Car-Chr10:380276 Car14g00102 Car-Chr14:521162 7.99E-171 dispersed
Car10g00084 Car-Chr10:380276 Car03g00361 Car-Chr3:4495009 3.56E-174 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
89112 PF00069 Pkinase 9.90E-52 CL0016 Car PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car10g00084 - - cmo:103502376 1113.21