Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car10g00123 ATGAAGGAGAGCAATGATGGATTTGTGCGGGCGGATCAGATTGATCTGAAGAGTTTGGATGAGCAGCTTGAGAGGCATCTTAGCAGAGCCTTGACCATGGAGAAGAACAAGAAGAAAGATGAAGACGGTAATAGCTTTCTCACTTCTGCAACCATTGCTCGCAGCAGGTCTACTAAAGTCGCCGCTAAGGAGCGGCAAGAGTGGGAGATCGATCCGTCCAAACTGATAATCAAGAGCGTCATTGCTCGTGGTACTTTCGGCACCGTCCACCGCGGCGTTTACGACGGACTAGATGTCGCTGTCAAGTTGCTGGATTGGGGAGAAGAAGGCCACAGGACAGAAGCTGAAATTGCTTCACTCAGGGCAGCTTTTAAACAGGAAGTTGCTGTTTGGCATAAACTAGAGCATCCCAATGTTACTAAGTTTATAGGGGCAACAATGGGCTCAGCGGAGTTACAGATCCAAACTGAAAATGGCCTAATAGGCATGCCAAGCAACATATGCTGTGTTGTGGTGGAATATCTTGCCGGTGGTGCCCTTAAATCTTATCTCATAAAGAACAGGAGAAGGAAGCTAGCTTTCAAGGTGGTTGTCCAATTGGCACTTGATCTTGCTAGAGGGTACCCCTGCTCACACGATTCCTTCTGTTCATTAGTCTTAACCTCCTATTTCTAG 675 47.41 MKESNDGFVRADQIDLKSLDEQLERHLSRALTMEKNKKKDEDGNSFLTSATIARSRSTKVAAKERQEWEIDPSKLIIKSVIARGTFGTVHRGVYDGLDVAVKLLDWGEEGHRTEAEIASLRAAFKQEVAVWHKLEHPNVTKFIGATMGSAELQIQTENGLIGMPSNICCVVVEYLAGGALKSYLIKNRRRKLAFKVVVQLALDLARGYPCSHDSFCSLVLTSYF 224
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 582369 585125 + Carg10355-RA Car10g00123 155025
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car10g00123 224 ProSiteProfiles Protein kinase domain profile. 75 224 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car10g00123 224 Pfam Protein tyrosine and serine/threonine kinase 77 207 IPR001245 GO:0004672|GO:0006468
Car10g00123 224 Coils Coil 16 36 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car10g00123 Car11g00101 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car10g00123 Car-Chr10:582369 Car17g01130 Car-Chr17:8673176 1.43E-67 dispersed
Car10g00123 Car-Chr10:582369 Car11g00101 Car-Chr11:579938 4.97E-148 wgd
Car10g00123 Car-Chr10:582369 Car11g01379 Car-Chr11:11265175 1.24E-110 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
89114 PF07714 PK_Tyr_Ser-Thr 1.00E-13 CL0016 Car PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car10g00123 - - csv:101209182 398.667