Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car10g00124 ATGCTGTTGGACAAAACACGTACAGTAAAAATTGCTGATTTTGGTGTTGCTAGAGTTGAGGCCTCAAATCCCAACGACATGACTGGGGAGACTGGGACACTCGGTTACATGGCTCCTGAGGTTCTCAATGGAAACCCATATAACAGGAAGTGCGACGTGTACAGCTTCGGTATCTGCCTGTGGGAAATCTATTGCTGTGACATGCCATATCCTGACCTTAGTTTCTCCGAAGTGACTTCTGCTGTGGTTCGTCAGAATTTGAGGCCAGAGATACCGAGATGTTGCCCGAGCTCCCTAGCGAATGTGATGAAGCGTTGTTGGGATGCAACCCCAGACAAGCGGCCCGAAATGGATGAAGTAGTTTCTATGTTGGAAGCCATTGACACGTCCAAGGGTGGAGGTATGATCCCTGTTGATCAAGCTCAGGGTTGTCTATGCTTTCGAAAATATAGAGGACCCTAA 462 48.05 MLLDKTRTVKIADFGVARVEASNPNDMTGETGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCCDMPYPDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDATPDKRPEMDEVVSMLEAIDTSKGGGMIPVDQAQGCLCFRKYRGP 153
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 585232 586112 + Carg10356-RA Car10g00124 155026
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car10g00124 153 PANTHER DUAL-SPECIFICITY KINASE TKL-PL-4 FAMILY-RELATED 1 147 - -
Car10g00124 153 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 1 147 - -
Car10g00124 153 Pfam Protein tyrosine and serine/threonine kinase 2 124 IPR001245 GO:0004672|GO:0006468
Car10g00124 153 Gene3D Transferase(Phosphotransferase) domain 1 1 141 - -
Car10g00124 153 ProSiteProfiles Protein kinase domain profile. 1 127 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car10g00124 153 SUPERFAMILY Protein kinase-like (PK-like) 2 124 IPR011009 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car10g00124 Car-Chr10:585232 Car11g01379 Car-Chr11:11265175 4.66E-111 dispersed
Car10g00124 Car-Chr10:585232 Car11g00102 Car-Chr11:582708 2.28E-113 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
89115 PF07714 PK_Tyr_Ser-Thr 7.60E-33 CL0016 Car PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car10g00124 - - csv:101209182 326.635