Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Car10g00124 | ATGCTGTTGGACAAAACACGTACAGTAAAAATTGCTGATTTTGGTGTTGCTAGAGTTGAGGCCTCAAATCCCAACGACATGACTGGGGAGACTGGGACACTCGGTTACATGGCTCCTGAGGTTCTCAATGGAAACCCATATAACAGGAAGTGCGACGTGTACAGCTTCGGTATCTGCCTGTGGGAAATCTATTGCTGTGACATGCCATATCCTGACCTTAGTTTCTCCGAAGTGACTTCTGCTGTGGTTCGTCAGAATTTGAGGCCAGAGATACCGAGATGTTGCCCGAGCTCCCTAGCGAATGTGATGAAGCGTTGTTGGGATGCAACCCCAGACAAGCGGCCCGAAATGGATGAAGTAGTTTCTATGTTGGAAGCCATTGACACGTCCAAGGGTGGAGGTATGATCCCTGTTGATCAAGCTCAGGGTTGTCTATGCTTTCGAAAATATAGAGGACCCTAA | 462 | 48.05 | MLLDKTRTVKIADFGVARVEASNPNDMTGETGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCCDMPYPDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDATPDKRPEMDEVVSMLEAIDTSKGGGMIPVDQAQGCLCFRKYRGP | 153 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
10 | 585232 | 586112 | + | Carg10356-RA | Car10g00124 | 155026 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Car10g00124 | 153 | PANTHER | DUAL-SPECIFICITY KINASE TKL-PL-4 FAMILY-RELATED | 1 | 147 | - | - | |
Car10g00124 | 153 | PANTHER | SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED | 1 | 147 | - | - | |
Car10g00124 | 153 | Pfam | Protein tyrosine and serine/threonine kinase | 2 | 124 | IPR001245 | GO:0004672|GO:0006468 | |
Car10g00124 | 153 | Gene3D | Transferase(Phosphotransferase) domain 1 | 1 | 141 | - | - | |
Car10g00124 | 153 | ProSiteProfiles | Protein kinase domain profile. | 1 | 127 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Car10g00124 | 153 | SUPERFAMILY | Protein kinase-like (PK-like) | 2 | 124 | IPR011009 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Car10g00124 | Car-Chr10:585232 | Car11g01379 | Car-Chr11:11265175 | 4.66E-111 | dispersed | |
Car10g00124 | Car-Chr10:585232 | Car11g00102 | Car-Chr11:582708 | 2.28E-113 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
89115 | PF07714 | PK_Tyr_Ser-Thr | 7.60E-33 | CL0016 | Car | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Car10g00124 | - | - | csv:101209182 | 326.635 |