Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car10g00125 ATGCATAACATTGCGTATTCTCGTTTGGGCGACCTTCAAAAATCCTTTTCTCTGTACCGGAAAGTGCCTTGGTGGGATCATATTCTTGAACCAGATTCCGATTTCGTCTTCCGATGGCACCGCATCTTCCTCGTTACTTGCTTGATCGCGCTCTTCGTCGATCCTCTCTACTTTTATCTTCCATTCATCGGCGCTCCTGGTTGTATGCAATTCAACCTCGGACTTGGCATCGTCGTCACTTTCTTCCGCACCATCGTCGATTTGTTCTCCATGTTTCATATGCTTATGAAGTTTCGCACCGCCTTCGTTGCGCCAAATTCTAGGGTTTTTGGCCGTGGAGATCTCGTTAAGGACCCTACGGCAATTGCTATGCGCTACCTCAAGAAGGATTTTGTCATCGATCTTGCCGCTACGCTTCCCCTGCCTCAGATTATAGGAGCTGCGTGGTATGTGGCATCCATTCAGCGGCAGGATGAGTGCTGGAAGATAGAATGTAGGAAGGAGATGAATACCACGCATTCTCCTTCTTGTAAGCCTTTTTTTCTGGACTGTGATAGTTTGAATGAGCCAGAACGAAAAGCGTGGCTAAGAATTACTCATGTTCTTACAAAATGTGATGCCCTAAATGACGACAAGAATTTTCAGTTTGGGATGTTTGCTGATGCCTTCACTGCCGAAGTTGCTTCAACAAACTTCATCGAGAAGTACTTCTACTGCCTTTGGTTTGGTCTTAAGAGTTTGAGTTCATATGGGCAAAATTTAGCGACCAGCACTTCTAGTGGTGAAATTTTATTTAGCATTCTGATTTGCTCAATGGGGTTGGTTCTGTTCTCACACCTCATAGGTCAAGTGCAGGGCTATCTGCAATCCACATCTGCAAGACTTGAAGAGTGGAGAGTAAAACGAAGAGACACAGAGGAATGGATGAGGCATCGACAGCTACCCATTCACTTGCAAGACCGAGTTCGTCGATTCGTTCAATATAAATGGATTGCAACTCGAGGTGTCGACGAAGAGTCGATCTTGCGCTCTTTACCTTTGGATCTTCGACGTCAAATTCAGAGGCATCTTTCTCTCGCACTTGTTCGCCGTGTTCCTTTTTTTGCACAAATGGATGCTCAGCTTTTGGATGCCATATGCGAGCGTCTTGTTCAATCCTTGAATACTAAAGACACATTCATAACCAGAGAGGGAGATCCAGTAAATGAAATGCTTTTCATCATCAGAGGCCAACTAGAGAGCTCCACCACCAATGGTGGCAGGTCAGGATTCTTCAACTCCATCACCCTCAGACCTGGCGACTTCTGCGGTGAAGAGCTACTAACATGGGCCTTAGTCCCATCCCCCAGCATAAGCCTTCCCTCCTCAACTCGAACCGTGAAGTCGCTCACTGAAGTCGAGGCATTCGCACTTCGAGCCGAAGATCTCAAGTTTGTAGCCAGCCAGTTCAAGCGCCTCCACAGCAAGAAACTCCAGCATGCTTTCAGATACTATTCCCACCAGTGGAGGACATGGGGATCTTGCTTCATACAAGCTGCTTGGAGAAGGTATGTGAAAAGAAAGCTAGCTATGGAGTTAGCAAGACAAGAGGAGCTGTATTACGCAACAATGATGGACCAAGAATACAGCCATGGCAGTGAAATGGAAGGTGAAGAAGGAGGTGGTGGTGGTGGTGGTGGTGGAACCAGTGGCACCAAAAATACCACTAAAAAGAAATCCCCACATCTTGGAATAACAATGTTGGCTTCAAAGTTTGCAGCAAATACAAGAAGAGGGCTTCACCAGAAGTCGTTGGCACTCGTCTCAGATGTCAGCAGCTTGAAAATGCCTAAGCTGTTTAAGCCTGAGGAACCAGATTTCTCTGCTTTCCGAGATCATAGTTGA 1884 46.39 MHNIAYSRLGDLQKSFSLYRKVPWWDHILEPDSDFVFRWHRIFLVTCLIALFVDPLYFYLPFIGAPGCMQFNLGLGIVVTFFRTIVDLFSMFHMLMKFRTAFVAPNSRVFGRGDLVKDPTAIAMRYLKKDFVIDLAATLPLPQIIGAAWYVASIQRQDECWKIECRKEMNTTHSPSCKPFFLDCDSLNEPERKAWLRITHVLTKCDALNDDKNFQFGMFADAFTAEVASTNFIEKYFYCLWFGLKSLSSYGQNLATSTSSGEILFSILICSMGLVLFSHLIGQVQGYLQSTSARLEEWRVKRRDTEEWMRHRQLPIHLQDRVRRFVQYKWIATRGVDEESILRSLPLDLRRQIQRHLSLALVRRVPFFAQMDAQLLDAICERLVQSLNTKDTFITREGDPVNEMLFIIRGQLESSTTNGGRSGFFNSITLRPGDFCGEELLTWALVPSPSISLPSSTRTVKSLTEVEAFALRAEDLKFVASQFKRLHSKKLQHAFRYYSHQWRTWGSCFIQAAWRRYVKRKLAMELARQEELYYATMMDQEYSHGSEMEGEEGGGGGGGGGTSGTKNTTKKKSPHLGITMLASKFAANTRRGLHQKSLALVSDVSSLKMPKLFKPEEPDFSAFRDHS 627
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 587288 590378 - Carg10357-RA Car10g00125 155027
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car10g00125 627 Pfam Ion transport protein 145 294 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Car10g00125 627 MobiDBLite consensus disorder prediction 544 573 - -
Car10g00125 627 Pfam Cyclic nucleotide-binding domain 390 478 IPR000595 -
Car10g00125 627 ProSiteProfiles cAMP/cGMP binding motif profile. 367 497 IPR000595 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car10g00125 Car-Chr10:587288 Car12g00767 Car-Chr12:7356547 1.29E-29 dispersed
Car10g00125 Car-Chr10:587288 Car14g00583 Car-Chr14:3167288 1.62E-49 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car10g00125 K05391 - csv:101209760 1001.89