Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Car10g00127 ATGCTGTCAAGTTCTTGCTTGAGTTTGTTAGAGCTATCGTCTTCGGATATGTTGGATTTTCCTCCTACACCAAGATCCGTTCCACGGGTGTTGACTGCTCCCGGGATATTTTCCGATAAGGATTCGGAAGTTTCCTCGTCGAAAGGCCAGGGGAGAAAAATAATAGTGGCAAATTTTCTTCCTCTTCATGCTAAGAAGGATACAGATTCCGGGCAATGGAACTTCAGTTTTGACGAGGATTCGCTTCTGCTTCAGCTGAAGGATGGATTCTCACCTGATGTAGATGTTATATATGTCGGGTCTTTAAAGGTCGATGTTGATGTCCGGGAGCAAGACGAGATTTCTCAGAAACTGTTGGAGGAATTTAACTGTGCACCGACTTTCATTCCTACGCACCTTCAGAAACAGTTCTATCATGGATTCTGTAAGCAACATTTGTGGCCACTTTTTCATTACATGATGCCGATTTCCCCTTACCATGGATCCCGCTTTGATCGACGACTTTGGCAAGCGTATCTTTCGGCTAACAAAAGGTTTGCCGATAAAGTTATGGAGGTAATCAATCTAGAAAAAGATTATGTCTGGGTTCATGACTACCACCTTATGGTTCTCCCTACTTTTTTGAGAAAACGCTACAGTCGAATCAAGCTTGGATTCTTCCTTCATAGTCCGTTTCCTTCATCGGAAATATATCGAACTCTGCCTGTTAGAGATGAGATTCTGAGAGCATTACTTAATGCAGACCTAATAGGTTTCCATACATTTGATTACGCTCGCCACTTCCTATCTTGTTGTAGTAGACTGCTTGGATTGGAGTATGAATCTAAACGAGGGTATCTCACGCTCGAGTATTTTGGCCGTACAATATACATTAAGATTTTGCCTGTTGGGGTTCATATGGGTCGACTTGAATTTGCATTAGACCAACCACAGACTTCAACCAAGGTCAAGGAAATCAAAGAAAATCTCCAAGGAAAGAAACTTATTCTTGGTGTTGATGACATAGACATATTTAAAGGTATAGGTCTGAAGTTACTAGCTATGGAACAGCTCTTGAGCCAGCATCCAGAGTTACGGGGCAATGTCGTTCTGGTGCAAATTCTAAATCCAGCACGGAGCAATGGGAATGATGTACAAGAAGCAAAACGGGAAACTTATGAGATAACCGAAAGGATTAACAAGGATTTTGGTTGTCCGGGCTATCAACCTGTAATCTTGATTGATCATCCTATTCCTCCTCACGAGAAGATTGCATATTACGTATCAGCGGAGTGCTGCATTGTAAATGCTCTCAGGGATGGTATGAACTTAGTTCCATATGAGTACATTGTTTGTCGACAGGGAACTTCAAAAATGGATAAAGTCTTGGAAGTCTCCCCCAGTTCACCTCGTACCAGCACGATTGTCGTGTCGGAATTTATAGGTTGTTCACCGTCCCTAAGTGGTGCGGTCAGGGTAAACCCCTGGGATTTTGACGCTGTAGCTGACGCACTTTATGCAGCTGTCACCATGCCTGCTTTAGAGAAGCAACTGAGGCACGAAAAGCATTACAGATACGTTAGCTCTCACGATGTTGCTTACTGGGCTCGCAGTTTCTTGCATGATTTGGAGCGAGCATGCCAAGAACACTACAGCAAACGTTGCTGGGGCATTGGTTTAGGTTTAAGTTTCAGAATTTTGTCACTTTCTCCAAGTTTCAGGAAGCTTTCCATTGAACATATTGGCTCTGCATATCGAAACGCTTCTAGGAGAGCGATATTTTTGGATTATGATGGGACTGTGGTTTCCGAAACTTTGGTGGTCAAATCCCCATCACCTGAAGTCATTTCTATCATCAACAACCTTTGCACGGATCCAAAGAACACCGTGTTTATTGTTAGTGGCAGGGGGAAAGTTTCCCTCGGTTCATGGTTCGATTCGTGTAAGAATCTAGGTATTGCCGCTGAACACGGGTACTACTTGAGGTGGAATAGGGACTCTGATTGGGAAGTTAGTCCATTAGCTGAAAACTTCGACTGGAAAAGGATTGCAGAACCTGTGATGAACCTATACACTGAGGCAACCGATGGTTCATACATAGAGACCAAGGATAGTGCCTTGGTATGGCACTATCAAGACGCGGATCCTTATTTTGGTTCGTGTCAGGCCATGGAGCTCTTGGACCACCTTGAAAACGTCCTTGCTAACGAACCCGTAGTCGTCAAAAGAGGCCAGCAGATCGTCGAAGTAAAACCGCAGGGTGTGACTAAAGGATTAGTTGCTGAAAGAGTTCTTTCCACAATGGTCAATTCTGATAAAGCACCCGACTTTGTGATGTGCATTGGAGACGATCGATCCGATGAAGATATGTTTGAGAGCATATTGAGTAGAAGCTATAGCTTATCCCTTGCTACGCCCCCGATGATATTTGCCTGTACTGTGGGACAAAAGCCTAGCAAAGCCAAATACTATTTAGACGATACCGCAGATGTTTTGACCTTGCTTCAAAGCCTGGCCAACTGTTCTAGTAGCCGTAAACTGAGATCGAGCTTTGAAACTCCTGTTTTGTTCGAGGATGATGTTTGA 2565 43.74 MLSSSCLSLLELSSSDMLDFPPTPRSVPRVLTAPGIFSDKDSEVSSSKGQGRKIIVANFLPLHAKKDTDSGQWNFSFDEDSLLLQLKDGFSPDVDVIYVGSLKVDVDVREQDEISQKLLEEFNCAPTFIPTHLQKQFYHGFCKQHLWPLFHYMMPISPYHGSRFDRRLWQAYLSANKRFADKVMEVINLEKDYVWVHDYHLMVLPTFLRKRYSRIKLGFFLHSPFPSSEIYRTLPVRDEILRALLNADLIGFHTFDYARHFLSCCSRLLGLEYESKRGYLTLEYFGRTIYIKILPVGVHMGRLEFALDQPQTSTKVKEIKENLQGKKLILGVDDIDIFKGIGLKLLAMEQLLSQHPELRGNVVLVQILNPARSNGNDVQEAKRETYEITERINKDFGCPGYQPVILIDHPIPPHEKIAYYVSAECCIVNALRDGMNLVPYEYIVCRQGTSKMDKVLEVSPSSPRTSTIVVSEFIGCSPSLSGAVRVNPWDFDAVADALYAAVTMPALEKQLRHEKHYRYVSSHDVAYWARSFLHDLERACQEHYSKRCWGIGLGLSFRILSLSPSFRKLSIEHIGSAYRNASRRAIFLDYDGTVVSETLVVKSPSPEVISIINNLCTDPKNTVFIVSGRGKVSLGSWFDSCKNLGIAAEHGYYLRWNRDSDWEVSPLAENFDWKRIAEPVMNLYTEATDGSYIETKDSALVWHYQDADPYFGSCQAMELLDHLENVLANEPVVVKRGQQIVEVKPQGVTKGLVAERVLSTMVNSDKAPDFVMCIGDDRSDEDMFESILSRSYSLSLATPPMIFACTVGQKPSKAKYYLDDTADVLTLLQSLANCSSSRKLRSSFETPVLFEDDV 854
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
10 601967 604725 + Carg10359-RA Car10g00127 155029
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Car10g00127 854 Pfam Glycosyltransferase family 20 52 537 IPR001830 GO:0003824|GO:0005992
Car10g00127 854 Pfam Trehalose-phosphatase 587 821 IPR003337 GO:0003824|GO:0005992
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car03g01201 Car-Chr3:9431037 Car10g00127 Car-Chr10:601967 1.32E-107 dispersed
Car10g00127 Car-Chr10:601967 Car18g00415 Car-Chr18:2600958 3.67E-132 dispersed
Car04g01747 Car-Chr4:10022884 Car10g00127 Car-Chr10:601967 3.47E-83 transposed
Car16g01107 Car-Chr16:9519005 Car10g00127 Car-Chr10:601967 3.59E-24 transposed
Car10g00127 Car-Chr10:601967 Car11g00104 Car-Chr11:595269 2.69E-87 wgd
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car10g00127 K16055 - csv:101209676 1577.38