Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car10g00138 ATGTTAGTCTTTTTAGTTTATTGCAATCTTTGCCAATACCATCGCATCGTCCTGTGTCTGTATGTCTTCCGCCCTCCTATGTTGTCGCAGAAAAGAAATCCAGATGATGGAGATGGTCCGGCGGATGGTGACAATCCTGATGATAAGCGTAGAAAATTCCGTTTCTGGAGTGTGATTCAGGATGCCCCATCATTGCAATCAATGCAACAGCTATTGGAGCCACTCATTCGTAAAGTGGTAAGGGAGGAGGTCGAATTGGCGCTCAGAAAGTACATTACTAGGGTGCAAAGGAATGATGGAAATGACGGTAAAGAAATCTGTTCTTCCGGGTCGAGATGCTTACAATTGAAGTTCGTAACTGGTGTGTCTCTCCCGGTATTTACCGGAGCTCGCATTGAAGGAAGAGATGGTTCCAACTTGACGGTGGCTTTGGTTGACACCATAAGTGGGGAAGTTGTTGACACTGGGCCTCAATCCTCAGCCAAAGTGGAAATTGTAGTCCTAGAGGGTGATTTTGAGGGTGGAGGTGATAATTATACTGTGGAGGAGTTTAAGAATAACATTGTAAGAGAGAGGGAGGGAAAGAAACCACTTCTTACAGGAGATACATTTGTGAGTCTTAAAGATGGCATTGGTATGGTAGGTGAGATTTCTTTCACTGACAATTCAAGCTGGACTCGATGCCGTCGGTTTAGGCTGGGTGCAAGAATTATAGACGATAATGTCGGAACAAGAGTACTGGAAGCAAAGACTGCATCGTTTGTGGTCAGGGATCACCGCGGAGAATTGTACAAGAAGCACCACCCTCCATCTCTGGGGGATGAAGTATGGAGATTGCAGAAAATTAGCAAGGATGGAGTCTATCATAAGCGCCTTAGCCAAGAAAAAATCGAGACGGTGCAAGATTTCCTAACTCAGCTTTATGTACAACCTTCAAGGCTTCGTAATATTTTTGGCCCCGGTATGTCTACTAAAATGTGGGAAGCTACAATTGAGCATGCACAGACATGTGTGCTCGATAAGAAGATTTACGTATACAAGCCTCGTGATTTGGAACAGAAAAGCGGAGTGGTATTTAATGTTGTAGGGCAAGTGATGGGGCTACTTTCAGATTACCAGTACGTTCCCAAAGATAAGCTATCTGAAGTTGAAAAGGCTGATGCTCACAACCTGGTTATCTCCGCATACGAACACTGGGAAAAAGTCGACTCTATTGACGATGAAAATTCTCTTGTAGGTGGCTCTTCTCACCCACTCAGTTTCCTTTACACCCCGAGCTCACCAATGGAGGATCATTCTTATGGTAGCAAGTACTTAGCTTCTCCAAAATTTAGTGGCTTTGATTTTACACCATCAAATGCATACACTTCTGAAATAATTTCATCGATGGGTTCTATTGGGAATTCGAGTGGCTTGGACGATCATGCTTTGCAGGGTTTTGATTCTATGGTTGTGAGATATGATCAGATGCCAAGTTCCCCAAACTTTGCCAACTCTTCTCTGATCTGTGATTCTGAGCCACTAAACTCATCTTTCTTTGATGTGGATCATCTGCAAGTTCTAGAGTCTGATTTCCAATGTAGCTCAATTTTCCAATCACGTTCTACTCTTCAAGGTGGCTCCTCATCATGTGGTGCTCAAATGAGATGGACTAAAGTATATGGTGTGCTAAAGTGGTACTTTTTGTTGAGATTTGTAATTCGGCGAAACAAAAGCGTATCCGAGAGAAACAAAGGTGCTGTACAGGGTCATGGAAAGGAAAAATTGGACTTTGGTTGA 1779 43.34 MLVFLVYCNLCQYHRIVLCLYVFRPPMLSQKRNPDDGDGPADGDNPDDKRRKFRFWSVIQDAPSLQSMQQLLEPLIRKVVREEVELALRKYITRVQRNDGNDGKEICSSGSRCLQLKFVTGVSLPVFTGARIEGRDGSNLTVALVDTISGEVVDTGPQSSAKVEIVVLEGDFEGGGDNYTVEEFKNNIVREREGKKPLLTGDTFVSLKDGIGMVGEISFTDNSSWTRCRRFRLGARIIDDNVGTRVLEAKTASFVVRDHRGELYKKHHPPSLGDEVWRLQKISKDGVYHKRLSQEKIETVQDFLTQLYVQPSRLRNIFGPGMSTKMWEATIEHAQTCVLDKKIYVYKPRDLEQKSGVVFNVVGQVMGLLSDYQYVPKDKLSEVEKADAHNLVISAYEHWEKVDSIDDENSLVGGSSHPLSFLYTPSSPMEDHSYGSKYLASPKFSGFDFTPSNAYTSEIISSMGSIGNSSGLDDHALQGFDSMVVRYDQMPSSPNFANSSLICDSEPLNSSFFDVDHLQVLESDFQCSSIFQSRSTLQGGSSSCGAQMRWTKVYGVLKWYFLLRFVIRRNKSVSERNKGAVQGHGKEKLDFG 592
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 652509 657270 - Carg10370-RA Car10g00138 155040
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car10g00138 592 Pfam Calmodulin binding protein central domain 272 337 IPR046830 -
Car10g00138 592 Pfam Calmodulin binding protein C-terminal domain 342 403 IPR046829 -
Car10g00138 592 Pfam Calmodulin binding protein-like N-terminal domain 114 259 IPR046831 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car10g00138 Car11g00113 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car10g00138 Car-Chr10:652509 Car11g00373 Car-Chr11:2042077 1.37E-106 dispersed
Car10g00138 Car-Chr10:652509 Car11g00113 Car-Chr11:646407 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car10g00138 - - csv:101211405 988.793