Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Car10g00145 | ATGGCGGCGGTTCCCGGCGAACTTGTTGGGGTTTCTGATGATGATTTGAAACAGAGTGGTTTGGCCCAGATTCATGTTCTTGCTGTTGATGATAGCCTCGTTGATCGGAAGGTTATTGAGCGGTTGCTGAAGATCTCGTCTTGTAAAGTGACTGCTGTTGAGAGTGGGAGAAGTGCTCTTCAATATCTGGGTTTGGATGGGGAAGCCAATTCTGTCCGGTTTAGTGATTTGAAGGTGAATCTCATCATTACAGATTATTCCATGCCTGAAATGAATGGATATGAACTGCTGAAGAAGATCAAGGAATCATCGGCTCTCCGGGAGATTCCTGTTGTGATAATGTCATCGGAGAATGTTTTGGGTCGAATAGAGAATTGCTTGAAGGAAGGGGCTGAGGAGTTCATAGTGAAGCCTGTGAAACTGTCTGATGTGAAACGATTGAAGGACTACTTCATTATGGAAGGAGAAAATGGAGGAAAGAAGATTAGTCATAAGAGGAAGCTTCGTGTTGATGATCATGATCATGATCATCACTTCTTGACTCCTGGGTCTCCGCCGCTGCCGCCGCCGATGGTGGGTTTCGACCATTGCCAAGGGTATCTGCAACGAATCACATGTTCGTCAAAGAAACCAAGGTTCCTCAATGGCGACCAGTTCACGTAA | 663 | 45.85 | MAAVPGELVGVSDDDLKQSGLAQIHVLAVDDSLVDRKVIERLLKISSCKVTAVESGRSALQYLGLDGEANSVRFSDLKVNLIITDYSMPEMNGYELLKKIKESSALREIPVVIMSSENVLGRIENCLKEGAEEFIVKPVKLSDVKRLKDYFIMEGENGGKKISHKRKLRVDDHDHDHHFLTPGSPPLPPPMVGFDHCQGYLQRITCSSKKPRFLNGDQFT | 220 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
10 | 689625 | 690563 | + | Carg10377-RA | Car10g00145 | 155047 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Car10g00145 | 220 | ProSiteProfiles | Response regulatory domain profile. | 25 | 152 | IPR001789 | GO:0000160 | |
Car10g00145 | 220 | Pfam | Response regulator receiver domain | 26 | 144 | IPR001789 | GO:0000160 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Car04g00284 | Car-Chr4:1597898 | Car10g00145 | Car-Chr10:689625 | 3.27E-17 | dispersed | |
Car10g00145 | Car-Chr10:689625 | Car14g00475 | Car-Chr14:2529750 | 1.62E-48 | dispersed | |
Car10g00145 | Car-Chr10:689625 | Car04g01645 | Car-Chr4:9472102 | 8.35E-65 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
4134 | PF00072 | Response_reg | 1.30E-21 | CL0304 | Car | TR |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Car10g00145 | K14492 | - | csv:101214143 | 283.878 |