Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car10g00152 ATGGCAGTGGGTCCCGACGCAGGAATTGATCCCAATCAGACGGCTGAGATACTGGCTTCTACCCGGAGGCTGATCGAACCGGAAGGGCCCTTCCCAGAAGAGGGAAGAAGAAGAAGAAGAGCAATAAAAATAATCGACAAAACACTGAGAGACGGATTAACGGGCGAAGTATTTGAAGAGCTTGAGCTGCGGTTCGGACTGGTTCTTGGGTCAAGCATGGAGCTTCAGAACACAGTGAAGGAAGCCCTAAACGCACTGTACCATCACCCTGACGATGCCTTCCGTATGCAGGCCGATCGGTGGCTTCAAGACTTCCAGCGCACTCTTGATGCCTGGCAGGTTGCTGATAATTTGCTTCACGAACCCACCAGCAATTTGGAAACTTTGATCTTTTGCTCTCAAACACTACGAAGCAAGGTACAGAGAGATTTTGAAGAGCTGCCTTCAGAAGCTTTTAGGCCCTTGCGTGACTCATTAAATAATTTATTAAGAAAATTTCACAAGGGCCCACCTAAAGTCCGAACTCAGATTAGCATAGCAGTGGCTGCATTAGCAGTACATGTTCCTGCTGATGATTGGGGAGAAGGTGGTATTGTAAATTGGCTCAGGAATGAGATGAACTCACATCCAGAGTATGTACCAGGATTTTTGGAGCTACTGACAGTTTTGCCTGAGGAAGTTTACAATTACAAGATCGCAGCTCGCCCGGATAGACGCCGTCAATTTGAAAAGGAACTCACATCCCAAATGGAAGTTACCCTTAATATCTTGACAGCTTGTTTGAATATTAATGAGCTGAAGGAGCAGGTGCTCGAGGCATTTTCTTCTTGGCTTCGATTAAAGCATGGGATCTCAGGATCTTTGCTTGCATCACATCCGTTAGTACTCACAGCTCTTGCAAGTTTAAATTCCGAGCTTCTCTCAGAGGCATCTGTAAACGTTATTTCTGAACTGATACACTATTCAGCAGCTGGAAGCTTAAGTGACCTCCCAGTGCACATGCCCTTAATTCAAGTAATTGTCCCTCAAGTTATGAATTTGAAGGCACAACTTAGAGATTCTTCAAAGGATGAAGAAGATGTGAAGGCCATTGCTCGGTTATTTGCTGACATGGGTGATTCATATGTTGAATTGATTGCAACTGGTTCTGATGAATCGATGTTAATAGTCCATGCCCTACTAGAAGTTACTTCACACCCTGAATACGACATTGCCTCCATGACCTTTAACTTTTGGCATAGCCTTCAGTTGAACTTGACCAAAAGGGATGCATATATTTCTTTTGGCAATGATGCTTCCGTTGAGGCTGAGAGGAAAAGGAGGTTGCAAATATTTTGTCCAGTTTATGAGTCACTCGTGTCCTTGGTTAGTTTCAGAGTCCAATACCCTAATGACTATCAAGACCTTTCTTATGAGGACCTCAAGGAGTTCAAGCAGACTAGATACGCTGTTGCAGATGTCTTAATTGATGCAGCATTGGTTTTAGGAGGTGATACGACTCTAAAACTTCTTTACGTGAAGCTTGTGGAGGCTGTTTCAAGCTGTGGAAATAGCGAACAAATTGAATGGCGTCCAGCAGAGGCTGCTTTGTTTTGCATCCGAGCTATATCAAATTACGTTTCAGTTGGTGAGGCCGAAATAATGCCCCAGGTCATGGGTTTACTTCCAAAACTTCCAAAGCAAGCCCAACTACTTCAGACAGTGTGCTACACTGTTGGAGCATACTCGAAGTGGCTTGATGCATCACCAAGTGGGCAGTCTATACTACCTTCAGTAATTGATATCCTCATGAATGGAATGAGCACATCCGAGGATTCTGCAGCTGCTGCAGCCCTAGCATTTAGACATATTTGTGCTGATTGCCGGAGAAAGCTTTGTGGATTTTTGGATGGTCTCTTTCATATATATAATATGACGGTCAATGGAGAAAGTAGTTTGAAGGTGACTGCTGAGGACTCATTGCACCTAGTGGAAGCATTAAGCATGGTTATCACTGAACTTGTGCCTGATCAAGCTAAGAGAGCACTGGAGGCATTGTGCTTGCCTGTTGTCGCTCCTCTGCAGGAAATTGTCAATCAAGGCCTTGAAGTATTGAATAAGAAGCCTTCTAATGAGTTGACAGTCCATATTGATCGGTTTGCTTACATATTCAGATATGTAAATCACCCCGAAGCGGTTGCAGATGCAATACAGAGGCTTTGGCCACTTTTTAAAGCCATCTTCGACATCCGTGCTTGGGACATGCGGACAATGGAATCTCTTTGCCGATCGTGCAAATATGCTGTGAGAACTTCCGGTAGATTTATGGGAATAACAATTGGAGCGATGTTGGAAGAAATTCAAGGTCTATATAAGCAGCACCATCAGCCTTGCTTTCTTTATCTGTCTAGTGAAGTTATAAAGATTTTTGGTTCTGACCCATCTTGCGCAAGCTATCTCCAAAATTTGATTGAAGCACTTTTCATGCACACAACACGTCTTCTCACAAATATTCAGGAATTTACTGCGAGGCCGGATATTGCCGATGACTGCTTTCTTCTAGCTTCAAGATGCATACGCTATTGCCCTCAACTATTTATTCCATCTTCAGTATTTCCAGCATTAATAGATTGTTCAATGGTCGGAATCACAGTACAGCACAGGGAAGCCTCAAACTCAATATTAACCTTCTTGGCTGATGTTTTTGATCTTGCAAATTCAAGCAAAAGTGAACAGTATATATCTAGAAGGGATGCAATTATTATACCTCGAGGTCCCGTTCTCCTTCGAATTTTGATTGCAGCCTTGACGGGGGCACTGCCAAGTTCTCGATTAGAGCCGGTGACATACACGCTATTAGCGTTAACTCGAGCTTATAAAGCGCAAGCGTTAGAATGGGCCAAGGAAAGTGTCTCATTGATTCCAGCAACAGCTGTTACTGAAAAAGAGCGGTCAAGATTTTTAAAAGCGTTATCTGATGCAGCCTTAGGGTGCGACATAAATACGCTCGCTGTACCAATAGAAGAGCTATCAGACGTATGTCGACGAAATAGAAACGTTCAGGAGATAGTTCAAGGAGCTTTGAGGCCTCTTGAACTGAATGTACGGCCTTTCTCAGCCCGCCCAGAAGAAATTCACGGCTGGCTTTGCAAATTTGTCGATCTTATTCGCCTTCTCAAGGGTTCCATTCCTCGATCGGATTCTCTAGCCACAATGGTGTCCGCATCGAACCGTCACAAAAACATGCACTCCCTTCTTGTGGCCAGTCTCACGAAGCTAACCATCCCTTCTTCGTCTCCTTCTTCTTCTCCTCCTCCTCCTTCATCCACAGCCGACTTCGATTTCTCCGACGTTTTTGGTCCTACAAATCCCTCCTCGTCATGTTTTCCGACGGACCCACAACACCACGAACAACAACCAGAGGTCATTCACAACAGATCTCACTCATTTGTGGGTCCATCTCCCCGGCTAACTCCTCCGTCTTCCCTTCCATTTTTCCGAGAAGTCGATCCACAGAGCGAGGAGGAGGAAGAGGAGGAGGATGAAGAAGATGACCTAGAAATCTCGACTCAAAATGGCGCTCAAGAGGAGATGAAGGGGGCGGATGAGAGTGAAAGTGGTGGTGGTGGTGGAGAGAAGACACAGGGGAAGATTGGAGTTGCGGATTTTGATATTCTTCGAGTGGTGGGAAAAGGGGCGTTTGGGAAGGTATTTTTGGTGAGGAAGAAAGGGGATTGTAAAGGAAACGGCTCTAATAATGATGGGATTTATGCTATGAAAGTGATGAGGAAGGATACCATCATAAAGAAGAATCATGTGGACTATATGAAGGCTGAGAGAGATATTCTCACAAAAGTTGCTCATCCTTTCATTGTTCAGCTCCGCTACTCTTTCCAGACCAAATCAAAACTGTACTTGATTCTTGATTTCATAAATGGAGGGCATCTCTTTTTCCATCTGTACAGGCAGGGAATCTTCAGTGAGGATCAGGCAAGGATCTATGCAGCCGAGATTGTATCGGCCGTTTCGCATCTTCACAGCTGTGGCATTGTGCACCGTGATCTGAAGCCGGAGAACATTCTTATGGATGCTGATGGGCATGTAGTGCTTACAGATTTTGGACTGGCCAAGGAAATCGAGATATCGAGCCGGTCTAATTCGATGTGTGGAACAACAGAGTATATGGCTCCAGAGATCTTGCTTTCTAAAGGTCACAACAAAGATGCTGATTGGTGGAGCGTTGGAGTCCTCTTGTATGAAATGCTTAGTGGCCAGTACGCCGTTTTTACTGTTGTTCTATTTCACGATTTGCAGCCACCGTTCACGCACGCTAATAGAAAGAAGCTTCAAGAAAGAATAATCAAAGAGAAAGTGAAGCTTCCACCATATCTGAGCACAGAAGCTCACTCTCTCCTCAGAGGGCTGTTACAAAAGGAGCCTTCTACAAGATTAGGCAGCGGACCCAACGGAGGGGACGAGATAAAGAAACACAAATGGTTTCGACCGGTGAACTGGAAGAAACTGGAATGTAGGGAGCTGCAACCAAAGTTCAAACCGGATGTCAATGGAAATGACTGCACGGCAAATTTCGATCATTGTTGGACAGCAATGCCTCCAGACGACTCACCAGCTCCGACGCCAACCGATGGTGGACACTTCCAGGGATATTCGTACGTTGCACCTAACCCTTGGCTTTCATCCTCTGGATAG 4689 44.96 MAVGPDAGIDPNQTAEILASTRRLIEPEGPFPEEGRRRRRAIKIIDKTLRDGLTGEVFEELELRFGLVLGSSMELQNTVKEALNALYHHPDDAFRMQADRWLQDFQRTLDAWQVADNLLHEPTSNLETLIFCSQTLRSKVQRDFEELPSEAFRPLRDSLNNLLRKFHKGPPKVRTQISIAVAALAVHVPADDWGEGGIVNWLRNEMNSHPEYVPGFLELLTVLPEEVYNYKIAARPDRRRQFEKELTSQMEVTLNILTACLNINELKEQVLEAFSSWLRLKHGISGSLLASHPLVLTALASLNSELLSEASVNVISELIHYSAAGSLSDLPVHMPLIQVIVPQVMNLKAQLRDSSKDEEDVKAIARLFADMGDSYVELIATGSDESMLIVHALLEVTSHPEYDIASMTFNFWHSLQLNLTKRDAYISFGNDASVEAERKRRLQIFCPVYESLVSLVSFRVQYPNDYQDLSYEDLKEFKQTRYAVADVLIDAALVLGGDTTLKLLYVKLVEAVSSCGNSEQIEWRPAEAALFCIRAISNYVSVGEAEIMPQVMGLLPKLPKQAQLLQTVCYTVGAYSKWLDASPSGQSILPSVIDILMNGMSTSEDSAAAAALAFRHICADCRRKLCGFLDGLFHIYNMTVNGESSLKVTAEDSLHLVEALSMVITELVPDQAKRALEALCLPVVAPLQEIVNQGLEVLNKKPSNELTVHIDRFAYIFRYVNHPEAVADAIQRLWPLFKAIFDIRAWDMRTMESLCRSCKYAVRTSGRFMGITIGAMLEEIQGLYKQHHQPCFLYLSSEVIKIFGSDPSCASYLQNLIEALFMHTTRLLTNIQEFTARPDIADDCFLLASRCIRYCPQLFIPSSVFPALIDCSMVGITVQHREASNSILTFLADVFDLANSSKSEQYISRRDAIIIPRGPVLLRILIAALTGALPSSRLEPVTYTLLALTRAYKAQALEWAKESVSLIPATAVTEKERSRFLKALSDAALGCDINTLAVPIEELSDVCRRNRNVQEIVQGALRPLELNVRPFSARPEEIHGWLCKFVDLIRLLKGSIPRSDSLATMVSASNRHKNMHSLLVASLTKLTIPSSSPSSSPPPPSSTADFDFSDVFGPTNPSSSCFPTDPQHHEQQPEVIHNRSHSFVGPSPRLTPPSSLPFFREVDPQSEEEEEEEDEEDDLEISTQNGAQEEMKGADESESGGGGGEKTQGKIGVADFDILRVVGKGAFGKVFLVRKKGDCKGNGSNNDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVAHPFIVQLRYSFQTKSKLYLILDFINGGHLFFHLYRQGIFSEDQARIYAAEIVSAVSHLHSCGIVHRDLKPENILMDADGHVVLTDFGLAKEIEISSRSNSMCGTTEYMAPEILLSKGHNKDADWWSVGVLLYEMLSGQYAVFTVVLFHDLQPPFTHANRKKLQERIIKEKVKLPPYLSTEAHSLLRGLLQKEPSTRLGSGPNGGDEIKKHKWFRPVNWKKLECRELQPKFKPDVNGNDCTANFDHCWTAMPPDDSPAPTPTDGGHFQGYSYVAPNPWLSSSG 1562
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 717498 736185 - Carg10384-RA Car10g00152 155054
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car10g00152 1562 ProSitePatterns Protein kinases ATP-binding region signature. 1222 1253 IPR017441 GO:0005524
Car10g00152 1562 Pfam Protein kinase domain 1217 1493 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car10g00152 1562 MobiDBLite consensus disorder prediction 1087 1208 - -
Car10g00152 1562 MobiDBLite consensus disorder prediction 1108 1127 - -
Car10g00152 1562 Pfam Exportin 1-like protein 170 315 IPR013598 -
Car10g00152 1562 ProSiteProfiles Protein kinase domain profile. 1216 1493 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car10g00152 1562 MobiDBLite consensus disorder prediction 1164 1183 - -
Car10g00152 1562 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1343 1355 IPR008271 GO:0004672|GO:0006468
Car10g00152 1562 ProSiteProfiles AGC-kinase C-terminal domain profile. 1494 1561 IPR000961 GO:0004674|GO:0005524|GO:0006468
Car10g00152 1562 Pfam Protein kinase C terminal domain 1514 1551 IPR017892 GO:0004674|GO:0005524|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car10g00152 Car-Chr10:717498 Car15g01249 Car-Chr15:9748482 8.09E-63 dispersed
Car16g00237 Car-Chr16:1506017 Car10g00152 Car-Chr10:717498 5.48E-07 dispersed
Car11g00124 Car-Chr11:693216 Car10g00152 Car-Chr10:717498 0 transposed
Car14g00717 Car-Chr14:3995258 Car10g00152 Car-Chr10:717498 1.21E-34 transposed
Car10g00152 Car-Chr10:717498 Car11g00123 Car-Chr11:688792 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
89116 PF00069 Pkinase 6.10E-66 CL0016 Car PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car10g00152 K15436 - csv:101215103 1785.39