Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car10g00160 ATGAGCCACACAATCAAATCAATTCCTGACCGAACACGTATACCGTCTACAACACTCAAATGCTTCTACTTCACAACGAAGAACGAGAGCCAGAAGAAGAACCCACCGCCGGAGATGGAAGCTTCGGGGTTTATGGCCAGTAAATGGATTGCAACGGCGTTTGCGATTTGGATCCAATGCAGCTGCGGTGCCGCCACCTTCAGCATCTACTCTTCGGTTCTCAAGTCCTCACAGGGCTACGACCAATCCACCCTTGGCACCGTTTCCGTTTTCAAGGACATCGGTACCAACGCCGGCATCATTTCTGGCTTTCTTTGCTCCGCCGTCACTTCCCCCTTCCCCCGCCGACCCTTTGTTGGGCCATGGATGGTGTACGCGGCGGGAGCGGTTCAGTGCTTCCTCGGATATATTTTCATGTGGGCCGCTGTCTCCGGACTGATCGATCGGCCGTCGGTTCCAGTGATGTGCTTCTTCATGTTGCTTGCTTCACATGCGCAAACGTTTTTCAGTACGGCGAATGTGGTAACTGGCGTGCACAATTTCAAGCACTATAGCGGCACGATTGTGGGCATCATGAAGGGATATCTTGGTCTAAGTGGAGCACTGGTAATCCAAGTTTATAACACGATTTGCAATGGAGAACCAAGCAATTTTCTCCTCTTGCTGGCGGTTTTGCCCACACTTCTTTCCATCATGTTCATGTGGTTTATCAGAATTGACAGAACAGAGTCCAGAAACGAGAGGAAGCATTTGGACTCATTATCTGCACATGCCGTGATAGTTGCTTTTTACCTAATGGCTGTCATCATTTTAGACAACACTTTCTCCCTTCCATCATCGACTCGTTCCTTCACATTCTCCATACTCCTAATTCTTCTTTCTGCTCCTCTTGGAATCGCCATTAATGCTCGGAGGGAGGACTTAAAAGTGACTGAAAAAACCCATGTTCTTAACAAATCTAAGTCAGTGGATACAGAGGATCTTGTTGAGTATCACGAGTTGCCCAGGGACGAGCGCCAGATAATGGCTGTTGCAAGCTCTAGTACCCCACAAGCCATGAATGTCTTGGAAGCTTTATGCACTATAAACTTCTGGCTGTTGTTTACAGCCATGGTGTGTGGAATGGGTTCTGGATTAGCCACAATAAACAACATGACACAGCTTGGCCAGTCTCTTGGCTACACAGTAACAGAGACGAAGACATTTGTTTCCTTATGGAGTATATGGAACTTTCTTGGACGTTTTGGAGCTGGCTACGCCTCTGATTATCTTCTCCACTCATACGGCTGTGCCAGGCCATTGTTAATGGCAATCACTCTACTCATAATGAGCGGTGGGCACCTCGTGATCGCCTCAAGTTTCTCTGGAAATCTTTACGTGGGTTCAACTCTTGTTGGCATATGCTACGGCTCACAGTGGTCGCTCATGCCCTCAATTACTTCGGACATATTTGGGTTAGAGCATATGGGAACTATTTTCAACGCCATAGCCACAGCCAGCCCTCTGGGGTCGTACGTTTTTTCTGTTAAAGTGATCGGTTACATCTACGACAAGGAAGCTGCCGGAGAACATGGGTCCTGCTCTGGCACACACTGTTTTGCGGTGTCTTTTCTAGTCATGGCCGTCGTGGCTTTCGTGGGATTTCTGGTAGCTGCTGCTCTCTTCTTTCGAACCAGGAGATTTTACGCTTTGCAAAGTAGAGCCGAACGTCTCAGTTGA 1719 48.23 MSHTIKSIPDRTRIPSTTLKCFYFTTKNESQKKNPPPEMEASGFMASKWIATAFAIWIQCSCGAATFSIYSSVLKSSQGYDQSTLGTVSVFKDIGTNAGIISGFLCSAVTSPFPRRPFVGPWMVYAAGAVQCFLGYIFMWAAVSGLIDRPSVPVMCFFMLLASHAQTFFSTANVVTGVHNFKHYSGTIVGIMKGYLGLSGALVIQVYNTICNGEPSNFLLLLAVLPTLLSIMFMWFIRIDRTESRNERKHLDSLSAHAVIVAFYLMAVIILDNTFSLPSSTRSFTFSILLILLSAPLGIAINARREDLKVTEKTHVLNKSKSVDTEDLVEYHELPRDERQIMAVASSSTPQAMNVLEALCTINFWLLFTAMVCGMGSGLATINNMTQLGQSLGYTVTETKTFVSLWSIWNFLGRFGAGYASDYLLHSYGCARPLLMAITLLIMSGGHLVIASSFSGNLYVGSTLVGICYGSQWSLMPSITSDIFGLEHMGTIFNAIATASPLGSYVFSVKVIGYIYDKEAAGEHGSCSGTHCFAVSFLVMAVVAFVGFLVAAALFFRTRRFYALQSRAERLS 572
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 762077 764303 - Carg10392-RA Car10g00160 155062
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car10g00160 572 Pfam Major Facilitator Superfamily 366 569 IPR011701 GO:0022857|GO:0055085
Car10g00160 572 Pfam Nodulin-like 48 300 IPR010658 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car10g00160 Car11g00131 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car10g00160 Car-Chr10:762077 Car20g00663 Car-Chr20:3738659 3.27E-90 dispersed
Car10g00160 Car-Chr10:762077 Car11g00131 Car-Chr11:731118 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car10g00160 - - csv:101216789 828.55