Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car10g00164 ATGGAAGAAAAGGGCGAGAAACCTGAGGTTTTGGAGGCTGTGTTGAAGGAAACTGTGGACTTGGAAAACATACCCATCGAGGAGGTCTTTGAAAATCTGAGATGTAGCAAAGAGGGTCTTACCACAGCGGCTGCTGAGGAACGGCTTCTTATTTTTGGTCACAACAAGCTTGAGGAGAAGAAGGAAAGTAAATTCTTGAAGTTTTTGGGGTTTATGTGGAATCCCCTCTCATGGGTTATGGAAGCTGCTGCTATTATGGCCATTGCACTCGCAAATGGTGGAGGAAAGCCTCCTGACTGGCAAGATTTTGTTGGTATTGTCGCACTGTTGCTTATCAACTCAACTATTAGTTTTATTGAGGAAAACAATGCCGGTAACGCTGCAGCTGCTCTAATGGCGAGCTTAGCACCCCAAGCCAAGATTCTTCGAGATGGAAGGTGGAGTGTGCAAGATGCTTCGGTTTTAGTTCCTGGTGATATTATAAGTATCAAACTTGGGGATATAATTCCAGCTGATGCTCGTCTTCTAGAAGGGGATCCATTGAAAATTGATCAGTCTGCTCTTACAGGCGAGTCTCTTCCTGTTACGAAAGGTCCGGGTGATGGCATATATTCTGGTTCTACTTGTAAACAGGGAGAGATTGAAGCGGTGGTCATTGCCACTGGTGTTCATACTTTCTTCGGCAAAGCAGCTCACCTTGTTGACACCACTAATCAAGTGGGACACTTCCAGAAGGTCTTAACTGCAATCGGGAACTTCTGCATATGTTCAATTGCTTTGGGGATGATTACAGAAATTATTGTCATGTACCCAATTCAAGATCGTGAATATCGTCCTGGAATTGACAATCTTCTCGTGCTTCTGATTGGAGGAATTCCAATTGCCATGCCCACAGTCCTCTCTGTGACCATGGCTATTGGCTCTCATAGGTTATCTCAGCAGGGTGCTATCACAAAGAGGATGACTGCAATTGAAGAGATGGCAGGTATGGATGTGCTTTGCAGTGATAAGACTGGAACACTTACATTAAACAAGCTAACTGTCGACAAAAATCTTGTTGAGGTTTTTGCTAAAGGAGTGGATGTGGATACTGTGGTTCTAATGGCAGCCCGGGCATCAAGAATGGAGAATCAAGATGCTATTGATACTGCTATTGTTGGGATGCTTGCTGACCCAAAAGAGGCTCGTGCCGGTATTCAAGAAGTACACTTCCTTCCATTTAACCCTACTGATAAGCGGACTGCATTGACTTACATAGACCATGAGGGTAAAATGCATAGAGTCAGCAAAGGTGCACCAGAGCAGATTTTGAACCTTGCGCACAATAAGTCGGAGATTGAGCGCAAAGTTCATGCTGTGATAGACAAGTTTGCAGAACGAGGTTTACGCTCTCTAGCTGTCGCATACCAGGAAGTTCCAGATGGTAGGAAGGAGAGTGCTGGAGGTCCATGGCAGTTTGTTGGCCTTCTGCCACTGTTTGACCCACCAAGGCATGATAGTGCAGAGACAATAAGGAGGGCTTTAAACCTCGGAGTGAATGTGAAGATGATTACTGGTGACCAGCTGGCTATTGGAAAGGAAACAGGACGTCGCTTGGGGATGGGAACCAACATGTATCCTTCATCTGCTTTATTAGGTCAGGACAAGGATGAGTCTATTGCTGCTTTACCTGTTGATGAACTGATAGAAAAAGCTGATGGCTTTGCTGGTGTTTTTCCTGAGCACAAATATGAGATTGTAAAGCGCCTGCAGGCTAGGAAACATATCTGTGGAATGACTGGCGATGGGGTAAATGATGCTCCCGCCCTTAAAAAAGCAGACATAGGCATTGCTGTTGCTGATGCCACCGATGCTGCTCGTAGTGCTTCAGACATAGTCCTCACAGAGCCTGGTTTGAGTGTTATCATTAGTGCTGTTTTGACCAGCCGAGCAATCTTTCAGAGGATGAAAAATTACACTATATATGCAGTTTCAATCACTATTCGTATAGTGCTTGGTTTCATGTTGCTGGCTCTCATATGGAAATTTGACTTTCCACCTTTTATGGTGCTCATCATTGCCATTCTCAATGATGGTACAATAATGACGATATCTAAGGACAGAGTGAAACCATCTCCTTTGCCTGATAGCTGGAAGCTGGCGGAAATTTTTACAACTGGCATTATACTTGGCGGCTACATGGCAATGATGACTGTTATCTTCTTTTGGGCAGCCTATAAGACCGACTTTTTTCCACGAATCTTTGGGGTGGCAACTCTTGAGAAAACTGCTCACGATGACATTAGGAAACTTGCCTCCGCTATTTATCTGCAAGTAAGCACTATAAGTCAGGCTCTTATATTTGTTACACGCTCTCGAAGTTGGTCTTATGTGGAACGTCCTGGACTATTACTGGTTGCGGCTTTTCTGGTTGCACAGCTGATTGCTACTTTAATTGCTGTTTATGCAAACTGGAGCTTTGCTGCCATTGAAGGAATTGGATGGGGTTGGGCTGGTGTAATCTGGCTTTACAACATCATCTTTTACATCCCACTTGATCTCATTAAGTTCTTTATACGATATGTTTTGAGTGGGAGGGCTTGGGACCTTGTTATTGAACAAAGGATTGCCTTTACAAGGCAAAAGGACTTCGGGAAGGAACAACGGGAGCTCCAATGGGCTCATGCTCAAAGAACACTACATGGATTGCAAGCACCTGATGCCAAGATGTTCCATGACCGGACCCATTTCACTGAGCTCAATCAGATGGCTGAAGAAGCCAAAAGGAGAGCAGAAATTGCAAGGTTGAGGGAACTACACACCCTGAAAGGCCATGTTGAATCAGTGGTGAGGCTGAAAGGACTTGACATTGATACAATTCAGCAAGCTTACACAGTGTGA 2880 44.62 MEEKGEKPEVLEAVLKETVDLENIPIEEVFENLRCSKEGLTTAAAEERLLIFGHNKLEEKKESKFLKFLGFMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGIVALLLINSTISFIEENNAGNAAAALMASLAPQAKILRDGRWSVQDASVLVPGDIISIKLGDIIPADARLLEGDPLKIDQSALTGESLPVTKGPGDGIYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDTTNQVGHFQKVLTAIGNFCICSIALGMITEIIVMYPIQDREYRPGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLVEVFAKGVDVDTVVLMAARASRMENQDAIDTAIVGMLADPKEARAGIQEVHFLPFNPTDKRTALTYIDHEGKMHRVSKGAPEQILNLAHNKSEIERKVHAVIDKFAERGLRSLAVAYQEVPDGRKESAGGPWQFVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPVDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLLALIWKFDFPPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLAEIFTTGIILGGYMAMMTVIFFWAAYKTDFFPRIFGVATLEKTAHDDIRKLASAIYLQVSTISQALIFVTRSRSWSYVERPGLLLVAAFLVAQLIATLIAVYANWSFAAIEGIGWGWAGVIWLYNIIFYIPLDLIKFFIRYVLSGRAWDLVIEQRIAFTRQKDFGKEQRELQWAHAQRTLHGLQAPDAKMFHDRTHFTELNQMAEEAKRRAEIARLRELHTLKGHVESVVRLKGLDIDTIQQAYTV 959
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 789874 797868 + Carg10396-RA Car10g00164 155066
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car10g00164 959 Pfam haloacid dehalogenase-like hydrolase 330 607 - -
Car10g00164 959 ProSitePatterns E1-E2 ATPases phosphorylation site. 336 342 IPR018303 -
Car10g00164 959 Pfam Cation transporter/ATPase, N-terminus 23 86 IPR004014 -
Car10g00164 959 Coils Coil 910 930 - -
Car10g00164 959 Pfam E1-E2 ATPase 135 313 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car10g00164 Car18g00122 CCT
Car10g00164 Car13g00763 CCT
Car10g00164 Car18g00122 ECH
Car10g00164 Car13g00763 ECH
Car10g00164 Car11g00134 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car10g00164 Car-Chr10:789874 Car12g00275 Car-Chr12:1821076 0 dispersed
Car10g00164 Car-Chr10:789874 Car11g00134 Car-Chr11:756845 0 wgd
Car10g00164 Car-Chr10:789874 Car13g00763 Car-Chr13:8589252 0 wgd
Car10g00164 Car-Chr10:789874 Car18g00122 Car-Chr18:649708 0 wgd
Car10g00164 Car-Chr10:789874 Car04g02647 Car-Chr4:20632240 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car10g00164 K01535 - csv:101217264 1795.02