Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car10g00187 ATGGCCACCGTCACTACTCAAGCTTCCGCCGCCGTTTTCCGGCCATGCGCCGCCCGATCGAGATTCCTTACTGGTTCTTCCGGCAAACTCCACCGTATGCTGTCGGTTAAACCAGTCACTGCTTCGTCTTCTTCATCTTTCAAGGTTGAAGCCAAGAAGGGAGAGTGGTTGCCTGGTCTGCCATCTCCGGCATACTTAAATGGCAGTCTTCCAGGGGACAATGGATTTGACCCACTGTCTCTAGCCGAGGACCCAGAGAACTTGAAGTGGTTCGTGCAAGCGGAGCTGGTGAACGGCCGGTGGGCTATGCTGGGTGTCGCCGGAATGCTTCTTCCGGAGGTTTTCACGAAGATCGGAATCATCAACGCTCCTCAATGGTACGACGCCGGAAAAGCAGAGTACTTCGCATCGTCTTCGACTCTGTTCGTGATCGAGTTCATCCTTTTCCATTACGTGGAAATCCGAAGGTGGCAGGACATCAAGAACCCCGGCAGCGTGAACCAAGACCCCATCTTCAAGCAATACAGTTTGCCCCCAAATGAAGTGGGTTACCCCGGTGGGATTTTCAACCCCCTCAATTTCGCTCCCACTCAGGAAGCCAAAGAGAAGGAACTAGCCAATGGGAGGCTTGCGATGTTGGCGTTTTTGGGGTTCATTGTGCAACACAACGTGACAGGGAAGGGGCCGTTTGAGAACCTTTTGCAGCACATTTCTGACCCATGGCACAACACCATTGTGCAGACGTTCAGTGGCAACTAA 759 53.1 MATVTTQASAAVFRPCAARSRFLTGSSGKLHRMLSVKPVTASSSSSFKVEAKKGEWLPGLPSPAYLNGSLPGDNGFDPLSLAEDPENLKWFVQAELVNGRWAMLGVAGMLLPEVFTKIGIINAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNEVGYPGGIFNPLNFAPTQEAKEKELANGRLAMLAFLGFIVQHNVTGKGPFENLLQHISDPWHNTIVQTFSGN 252
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 901163 902103 - Carg17957-RA Car10g00187 155089
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car10g00187 252 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 1 252 IPR001344 GO:0009765|GO:0016020
Car10g00187 252 PANTHER CHLOROPHYLL A-B BINDING PROTEIN, CHLOROPLASTIC 1 252 - -
Car10g00187 252 Pfam Chlorophyll A-B binding protein 63 222 IPR022796 -
Car10g00187 252 Gene3D Chlorophyll a/b binding protein domain 63 242 - -
Car10g00187 252 SUPERFAMILY Chlorophyll a-b binding protein 53 249 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car10g00187 Car11g00156 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car04g02495 Car-Chr4:19815225 Car10g00187 Car-Chr10:901163 2.83E-48 dispersed
Car10g00187 Car-Chr10:901163 Car11g00797 Car-Chr11:4703072 6.08E-49 dispersed
Car15g00417 Car-Chr15:2174053 Car10g00187 Car-Chr10:901163 1.05E-35 dispersed
Car03g01249 Car-Chr3:9642401 Car10g00187 Car-Chr10:901163 3.54E-56 transposed
Car11g00625 Car-Chr11:3410039 Car10g00187 Car-Chr10:901163 1.14E-65 transposed
Car12g00507 Car-Chr12:3351210 Car10g00187 Car-Chr10:901163 1.32E-66 transposed
Car18g00644 Car-Chr18:7714155 Car10g00187 Car-Chr10:901163 1.74E-49 transposed
Car01g00733 Car-Chr1:4473173 Car10g00187 Car-Chr10:901163 2.99E-148 wgd
Car10g00187 Car-Chr10:901163 Car11g00156 Car-Chr11:866857 2.43E-144 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car10g00187 K08910 - csv:101222701 479.174