Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Car10g00187 | ATGGCCACCGTCACTACTCAAGCTTCCGCCGCCGTTTTCCGGCCATGCGCCGCCCGATCGAGATTCCTTACTGGTTCTTCCGGCAAACTCCACCGTATGCTGTCGGTTAAACCAGTCACTGCTTCGTCTTCTTCATCTTTCAAGGTTGAAGCCAAGAAGGGAGAGTGGTTGCCTGGTCTGCCATCTCCGGCATACTTAAATGGCAGTCTTCCAGGGGACAATGGATTTGACCCACTGTCTCTAGCCGAGGACCCAGAGAACTTGAAGTGGTTCGTGCAAGCGGAGCTGGTGAACGGCCGGTGGGCTATGCTGGGTGTCGCCGGAATGCTTCTTCCGGAGGTTTTCACGAAGATCGGAATCATCAACGCTCCTCAATGGTACGACGCCGGAAAAGCAGAGTACTTCGCATCGTCTTCGACTCTGTTCGTGATCGAGTTCATCCTTTTCCATTACGTGGAAATCCGAAGGTGGCAGGACATCAAGAACCCCGGCAGCGTGAACCAAGACCCCATCTTCAAGCAATACAGTTTGCCCCCAAATGAAGTGGGTTACCCCGGTGGGATTTTCAACCCCCTCAATTTCGCTCCCACTCAGGAAGCCAAAGAGAAGGAACTAGCCAATGGGAGGCTTGCGATGTTGGCGTTTTTGGGGTTCATTGTGCAACACAACGTGACAGGGAAGGGGCCGTTTGAGAACCTTTTGCAGCACATTTCTGACCCATGGCACAACACCATTGTGCAGACGTTCAGTGGCAACTAA | 759 | 53.1 | MATVTTQASAAVFRPCAARSRFLTGSSGKLHRMLSVKPVTASSSSSFKVEAKKGEWLPGLPSPAYLNGSLPGDNGFDPLSLAEDPENLKWFVQAELVNGRWAMLGVAGMLLPEVFTKIGIINAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNEVGYPGGIFNPLNFAPTQEAKEKELANGRLAMLAFLGFIVQHNVTGKGPFENLLQHISDPWHNTIVQTFSGN | 252 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
10 | 901163 | 902103 | - | Carg17957-RA | Car10g00187 | 155089 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Car10g00187 | 252 | PANTHER | CHLOROPHYLL A/B BINDING PROTEIN | 1 | 252 | IPR001344 | GO:0009765|GO:0016020 | |
Car10g00187 | 252 | PANTHER | CHLOROPHYLL A-B BINDING PROTEIN, CHLOROPLASTIC | 1 | 252 | - | - | |
Car10g00187 | 252 | Pfam | Chlorophyll A-B binding protein | 63 | 222 | IPR022796 | - | |
Car10g00187 | 252 | Gene3D | Chlorophyll a/b binding protein domain | 63 | 242 | - | - | |
Car10g00187 | 252 | SUPERFAMILY | Chlorophyll a-b binding protein | 53 | 249 | - | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Car10g00187 | Car11g00156 | CST |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Car04g02495 | Car-Chr4:19815225 | Car10g00187 | Car-Chr10:901163 | 2.83E-48 | dispersed | |
Car10g00187 | Car-Chr10:901163 | Car11g00797 | Car-Chr11:4703072 | 6.08E-49 | dispersed | |
Car15g00417 | Car-Chr15:2174053 | Car10g00187 | Car-Chr10:901163 | 1.05E-35 | dispersed | |
Car03g01249 | Car-Chr3:9642401 | Car10g00187 | Car-Chr10:901163 | 3.54E-56 | transposed | |
Car11g00625 | Car-Chr11:3410039 | Car10g00187 | Car-Chr10:901163 | 1.14E-65 | transposed | |
Car12g00507 | Car-Chr12:3351210 | Car10g00187 | Car-Chr10:901163 | 1.32E-66 | transposed | |
Car18g00644 | Car-Chr18:7714155 | Car10g00187 | Car-Chr10:901163 | 1.74E-49 | transposed | |
Car01g00733 | Car-Chr1:4473173 | Car10g00187 | Car-Chr10:901163 | 2.99E-148 | wgd | |
Car10g00187 | Car-Chr10:901163 | Car11g00156 | Car-Chr11:866857 | 2.43E-144 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Car10g00187 | K08910 | - | csv:101222701 | 479.174 |