Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car10g00196 ATGGCGCTGTTCAGAAGGTTCTTTTACAGGAAGCCGCCGGATCGGCTTCTTGAAATCTCCGAGAGAGTCTATGTGTTTGATTGCTGCTTCTCCACGGAAGTGTTGGAAGAAGAAGAATATAAGGTCTACTTGGATGGCATTGTAGCACAGTTGCAAGGCCACTTTCCCGATGCCTCTTTCATGGTTTTCAACTTCAGAGAAGGTGATAGGCGTAGTCAAATTTCTGATGTACTGACTCAGTATGACATGACAGTTATGGACTATCCTCGGCAATATGAGGGGTGTCCTTTACTGTCATTGGAGATGGTTCACCACTTCCTTCGATCTAGTGAAAGCTGGTTGTCGGTGGAGGGTCAACAGAATGTTCTATTGATGCACTGTGAAAGAGGAGGATGGCCTGTTCTTGCATTCATGCTAGCTGGTCTTCTCTTGTATAGAAAACAATACAGTGGGGAGCAGAAGACCCTTGAAATGGTCTACAAGCAAGCTCCTAAGGAACTTCTCCATCTTTTGTCTCCTTTAAATCCTCAGCCTTCCCATCTGAGATATCTTCAATACATTTCCAGGAGAAATTTAGGTTCCGATTGGCCTCCATCGGATACACCTCTAGTTTTGGATTGTTTAATACTTAGAGTTCTACCTCTTTTTGACGGGGGAAAGGGATGTAGGCCTGTTGTGCGTGTTTATGGTCAAGACCCCTCAACACCAGCAAATAGAACTTCAAGGCTTTTATTTTCAACATCAATCAAAAGAAAACATATCCGCAACTACCTACAGGCAGAGTGTATGCTGGTGAAAATTGATATTCATTGCCATGTCCAAGGAGACGTAGTTCTTGAATGCATCCATTTGGATGAAGATCTAGTGCACGAGGAGATGATGTTTAGAGTTATGTTTCACACAGCATTCGTAAGATCAAACATTATGATGCTGAACCGTGACGAAGTTGATGTTTTATGGGATGCAAGGGACCAATTTCCTAAGGACTTCAGAGTTGAGGCACTCTTTTTGGATGCTGATGCTGTTGTCCCCAGTCTCACCACAGCCTTAGACGATGAAGACGGTAATGAAACTGGAGCTGCTTCTCCTGAAGAATTTTTTGAGGTTGAAGAGATCTTCAGTAATACAATGGATGGGCAGGAAGCAAAGGGGTCCAATGATCCTCAAGTGGTCAAGCATGTAAACCGGAACGAAGATTTGAAGGAGGACTTGGATCCTCATGCATTCCAAGATTGTGCATCTGACGATGGAAATCATCTTAGGCATGATAATAAATCAGATTTTGATGCAGTGAAGGACATTACTGTGGATGATGTGAGGTACAAACTGGATGAAAATATATATCCTGATCTTAATGTAGTTAAGGACATTGGTGTAGATGATGGGGATATGAATTCAAATTCCTTCATGGTTGCTGCTAATGTCCTGACCCATGTGGAAGCCCAGGGTTTGGTGGATGATGCATACGAGAAATTTGAAGATATAGAAGAAAAGGATGATGGTAGATATACTACAACTGAGAAATTGGAAAACAAGGCTCTGCAGAAAAAGTTGAGTGCTGATGGTTCAGAATCTGAAAAATTGCAAATACCGATTTCCAAGAAACAGCCTATTTCAAGTGCAAAACCGACCACTGATATGGGTTTAACTGAACAGAAAGTCGAACAACAAGAGGCTCAAGGGTTTTCTGGAAAACAAGCAAGGCCAAATATAGTTTCTAGGTGGATCCCACCTAACAAAGGCTCCTATATGAATTCTGTGCATGTTTCCTATCCGCCTTCAAGATATAACAGTGCCCCTGCTGCCACTCTCAGTTCCCTAGTTGCTACAGATGTGAATAATGACGTGGACTCTATAAGGCCTTCATACTCTGCACTTGGGGAACTCGTGCTTGGCCCATCGTCTCCAGTTGAGTCGATAGAGGAGACATATTCTTCCTCTGAAACTTTAAAACCATCACACTGCGATCCACAACTTGAAGTACCTCCTCCCCCACTGCCCACAAAGCCTCCATCTCCATATTTTCCATCACCCCCCCGAGCAAATGCAATACCTCCTCCACCACCTCCACCACCTCCACCACCTACTTCATTTCATCATATTGAGTCAACGTACTCTCCTCCACCACTTTCTGTGTCTTCAGCGCCACCACCCCTAGTTAGCTCATCAAAGACAGTGATTACCCCTTCCCCTCCCCCTCCCCCTCCATTCAGTAGGCAGAATAGTGTTTTTTCCCATTCTTCTACACAACCATCATGGGAGCAAATATATTCTTCCGTTTCTAATGCAATGGTGGCTGGTTCTATACCGCCTCCCCCTCCACCACCCCCACCACCACCTCTCTCGTCTCTCTCTCTGGTTAGGCCATATACATCAAAGAATATTGTAAGTACTCCTCCAGCACCTGTTTTATCCCCTCCCCCACCTTCTGTGATGCATGAAACACTTGCTTCACCACCTCCACCATCCTCACCTGCTTCATATGGTGATAAAGCATCACCAACTCTAGCATCTCCAGCACCCTCCCCTATTACTTCAGTTCATGGTGCTTCTCCACCCCCGCCCCCAACACCTCCACTTATTACTTCAGTTCATGGTGCTTCTCCACCCCCACCCCCACCCCCACCCTCACATATTAGTTCAGTTCATGGTGCTTCCTTGCCCCCGCCTTTAGCACCTCAAACAACCCCACCTATTACTTCAGCATTTCCTTCACCATCTCTAATGAAAAGAACACCACCTCCACCACCTCCACCCCCACCCATGCATGGTGCATCTCCAACAACATCTTTATTAGGACCACCACCTCCTTCGATGCATGGGGCTTTTCCACCATTGCCTCTCCACCACCTCCGCGCTCCACCAATCCATGGGACTCCGTCACCATCACCACCCCCACCACCACCGCCTCCACCAATGCACGGGGCTCCTCCCCCACCACCACCTCCTCCACCAATGCATGGGGCTCCTCCACCACCACCACCACCTCCTCCACCAATGCATGGGGCTCCTCCACCACCACCACCACCTCCTCCACCAATGCACGGGGCTCCTCCACCACCACCACCTCCTCCACCAATGCACGGGGCTCCTCCTCCACCACCACCACCTCCTCCACCAATGCACGGGGCTCCTCCTCCACCACCACCACCACCTCCACCAATGCATGGGGCTCCTCCACCCCCGCCACCACCTCCTCCTATGTATGGGGCTCCTCCACCCCCGCCACCACCTCCTCCTATGTATGGGGCTCCTCCCCCACCACCACCTCCTCCTATGTATGGGGCTCCTCCCCCACCACCACCTCCTCCAATGCATGGGGCCCCTCCCCCGCCTCCGCCACCACCTGGTGGAGGGAGAGCCCCTCCCCCACCGCCGCCACCACCCGGTGGAGGGAGAGCCCCTCCCCCGCCTCCACCACCGCCCGGTGGTGGGAGAGCCCCTCCCCCGCCTCCACCACCGCCCGGTGGTGGGAGAGCCCCTCCCCCGCCTCCACCACCCGGTGGTGGGAGAGCCCCTCCACCGCCTCCACCACCCGGTGGTGGGAGAGCCCCACCACCACCTCCCCCACCGGGTGGTGGTGGAGCCCCAGCACCCCCTCCCCCTCCGGGAGGTCGTGGAGCCCCACCCCCTCCTAGACCTCCTGGTGGTGGTGGACCTCCTCCACCTCCACCACTAGGTGCAAGAGGAGCAAACGCTCCACCTGACCCTAGAGGTTTGTCCTCTGGAAGAGGGCGTGGGCTATCACGCTCAACAGCTACAGCACCTCGAAGGTCCTCCTTAAAGCCCCTACATTGGAGCAAAGTAACGAGAGTTCTGCAAGGGAGCCTGTGGGAAGAACTGCAGAGATATGGAGAACCTCAAATTGCACCAGAGTTTGATGTGTCTGAGTTAGAGAGCCTCTTTTCTGCAAATGTTCCCAAACCAGCTGATGGAGGTAAATCTGGAGGGCGAAGGAAGTCTGTTGGATCCAAAAGTGACAAAGTTCACCTGATTGACCTCAGAAGAGCTAATAACACTGAAATTATGCTCACCAAAGTAAAGATGCCTCTTCCTGATATGATGGCTGCAGTGCTAGCTATGGACGAGTCAGTATTAGATGTTGATCAGGTGGAAAATCTCATAAAATTTTGTCCTACGAAGGAGGAGATGGAACTTCTTAAGGGATACACTGGTGATAAGGATAACCTTGGAAAGTGTGAACAGTATTTTTTGGAGCTGATGAAAGTGCCTCGAGTAGAGTCAAAGTTGAGAGTGTTTTCCTTTAAGATTCAGTTCGGCTCTCAGATATCAGAATTTAAGAAGAGTTTAAATACTGTCAACTCTGCATGTGTCGAGGTTAGGAATTCTGCCAAACTGAAGGAGATTATGAAGAAAATTCTTTATCTGGGGAATACACTGAATCAAGGAACAGCAAGGGGTTCTGCAGTTGGCTTCAAGTTGGACAGTCTTTTAAAGCTTGCTGATACACGTGCTTCTAATAATAAGATGACACTCATGCATTATCTTTGCAAGGTCCTCGCTTCAAAGACACCAGCTCTTCTTAATTTTCATTTGGACCTCGGTAGCCTAGAGGCAGCAACCAAGATACAATTGAAGTCTTTAGCAGAAGAAATGCAAGCTATAATTAAGGGGTTAGAAAAGGTCAGGCAGGAGCTTGTTGCTTCTGAAGGTGATGGTCCAGTCTCTGAAATTTTTCGCAAGACGCTGAAAGAATTTATTGCTATCGCTGAGACAGAGGTGGCATCAGTGACAAATCTATACTCTACTGTGGGTAGAAATGCAGATGCACTTGCACTATATTTTGGTGAGGATCCAGCTCGTTGTCCATTTGAGCAGGTTACAGTGACATTATTGAACTTTATGAGATTATTTCGGAAAGCCCACGAAGAAAACTGCAAACAGGCCGAACTGGAAAGGAAAAAGGCGGAGAAAGAAGCTGAAATGGAGAAAGCCAAAGGAATTAGCCTTACGAAGAAGAGTGTGAAATAG 4992 48.94 MALFRRFFYRKPPDRLLEISERVYVFDCCFSTEVLEEEEYKVYLDGIVAQLQGHFPDASFMVFNFREGDRRSQISDVLTQYDMTVMDYPRQYEGCPLLSLEMVHHFLRSSESWLSVEGQQNVLLMHCERGGWPVLAFMLAGLLLYRKQYSGEQKTLEMVYKQAPKELLHLLSPLNPQPSHLRYLQYISRRNLGSDWPPSDTPLVLDCLILRVLPLFDGGKGCRPVVRVYGQDPSTPANRTSRLLFSTSIKRKHIRNYLQAECMLVKIDIHCHVQGDVVLECIHLDEDLVHEEMMFRVMFHTAFVRSNIMMLNRDEVDVLWDARDQFPKDFRVEALFLDADAVVPSLTTALDDEDGNETGAASPEEFFEVEEIFSNTMDGQEAKGSNDPQVVKHVNRNEDLKEDLDPHAFQDCASDDGNHLRHDNKSDFDAVKDITVDDVRYKLDENIYPDLNVVKDIGVDDGDMNSNSFMVAANVLTHVEAQGLVDDAYEKFEDIEEKDDGRYTTTEKLENKALQKKLSADGSESEKLQIPISKKQPISSAKPTTDMGLTEQKVEQQEAQGFSGKQARPNIVSRWIPPNKGSYMNSVHVSYPPSRYNSAPAATLSSLVATDVNNDVDSIRPSYSALGELVLGPSSPVESIEETYSSSETLKPSHCDPQLEVPPPPLPTKPPSPYFPSPPRANAIPPPPPPPPPPPTSFHHIESTYSPPPLSVSSAPPPLVSSSKTVITPSPPPPPPFSRQNSVFSHSSTQPSWEQIYSSVSNAMVAGSIPPPPPPPPPPPLSSLSLVRPYTSKNIVSTPPAPVLSPPPPSVMHETLASPPPPSSPASYGDKASPTLASPAPSPITSVHGASPPPPPTPPLITSVHGASPPPPPPPPSHISSVHGASLPPPLAPQTTPPITSAFPSPSLMKRTPPPPPPPPPMHGASPTTSLLGPPPPSMHGAFPPLPLHHLRAPPIHGTPSPSPPPPPPPPPMHGAPPPPPPPPPMHGAPPPPPPPPPPMHGAPPPPPPPPPPMHGAPPPPPPPPPMHGAPPPPPPPPPPMHGAPPPPPPPPPPMHGAPPPPPPPPPMYGAPPPPPPPPPMYGAPPPPPPPPMYGAPPPPPPPPMHGAPPPPPPPPGGGRAPPPPPPPPGGGRAPPPPPPPPGGGRAPPPPPPPPGGGRAPPPPPPPGGGRAPPPPPPPGGGRAPPPPPPPGGGGAPAPPPPPGGRGAPPPPRPPGGGGPPPPPPLGARGANAPPDPRGLSSGRGRGLSRSTATAPRRSSLKPLHWSKVTRVLQGSLWEELQRYGEPQIAPEFDVSELESLFSANVPKPADGGKSGGRRKSVGSKSDKVHLIDLRRANNTEIMLTKVKMPLPDMMAAVLAMDESVLDVDQVENLIKFCPTKEEMELLKGYTGDKDNLGKCEQYFLELMKVPRVESKLRVFSFKIQFGSQISEFKKSLNTVNSACVEVRNSAKLKEIMKKILYLGNTLNQGTARGSAVGFKLDSLLKLADTRASNNKMTLMHYLCKVLASKTPALLNFHLDLGSLEAATKIQLKSLAEEMQAIIKGLEKVRQELVASEGDGPVSEIFRKTLKEFIAIAETEVASVTNLYSTVGRNADALALYFGEDPARCPFEQVTVTLLNFMRLFRKAHEENCKQAELERKKAEKEAEMEKAKGISLTKKSVK 1663
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 937448 952286 - Carg17947-RA Car10g00196 155098
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car10g00196 1663 MobiDBLite consensus disorder prediction 1643 1663 - -
Car10g00196 1663 MobiDBLite consensus disorder prediction 630 1261 - -
Car10g00196 1663 MobiDBLite consensus disorder prediction 785 799 - -
Car10g00196 1663 Coils Coil 1532 1552 - -
Car10g00196 1663 Pfam C2 domain of PTEN tumour-suppressor protein 200 336 IPR014020 -
Car10g00196 1663 MobiDBLite consensus disorder prediction 657 698 - -
Car10g00196 1663 MobiDBLite consensus disorder prediction 638 653 - -
Car10g00196 1663 ProSiteProfiles C2 tensin-type domain profile. 200 339 IPR014020 -
Car10g00196 1663 ProSiteProfiles Formin homology-2 (FH2) domain profile. 1251 1651 IPR015425 -
Car10g00196 1663 MobiDBLite consensus disorder prediction 1643 1657 - -
Car10g00196 1663 Coils Coil 1626 1655 - -
Car10g00196 1663 MobiDBLite consensus disorder prediction 846 879 - -
Car10g00196 1663 Pfam Formin Homology 2 Domain 1256 1625 IPR015425 -
Car10g00196 1663 MobiDBLite consensus disorder prediction 800 827 - -
Car10g00196 1663 MobiDBLite consensus disorder prediction 908 1231 - -
Car10g00196 1663 MobiDBLite consensus disorder prediction 1304 1326 - -
Car10g00196 1663 MobiDBLite consensus disorder prediction 740 765 - -
Car10g00196 1663 MobiDBLite consensus disorder prediction 767 784 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car10g00196 Car13g00929 CCT
Car10g00196 Car11g00171 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car02g00851 Car-Chr2:6133121 Car10g00196 Car-Chr10:937448 3.13E-161 dispersed
Car02g01412 Car-Chr2:9268644 Car10g00196 Car-Chr10:937448 4.14E-133 dispersed
Car09g00362 Car-Chr9:1972665 Car10g00196 Car-Chr10:937448 2.76E-176 dispersed
Car10g00196 Car-Chr10:937448 Car13g00929 Car-Chr13:9535938 5.12E-43 dispersed
Car01g00745 Car-Chr1:4513928 Car10g00196 Car-Chr10:937448 0 wgd
Car10g00196 Car-Chr10:937448 Car11g00171 Car-Chr11:942519 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car10g00196 - - cmos:111429670 1633.62