Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Car10g00222 | ATGCGTATGAGCTGCAACGGATGCCGAGTTCTTCGCAAAGGCTGCAGTGAGAGCTGCTCCATCAGACCCTGTCTTCAATGGATCAAAACCCCTCAATCCCAAGCCAACGCTACTTTCTTCCTCGCCAAATTCTACGGCCGAGCTGGCCTTCTTAACCTCATCAATGCCGGCCCCGACCATCTCCGCCCTGCTATTTTTAAATCTTTGCTGTTCGAGGCGTGTGGCCGGATTGTCAATCCGATCTTCGGGTCGGCCGGATTGTTGTGGTCCGGGAGTTGGCAGCTGTGTCAGGACGCCGTGGAAGCCGTTCTAAATGGCGCACCGATTCCGCCGGTTTCTTACGAGATGGCGACGTCCCACATGGGCCCACCTTTGAAAGGCTGCGACATCCGCCACGTGTCCAAACAGCAAGGCTCCGGTCTCAGTGAGATAAAGAAGCGGCGGAGGTTCAAGCGCAAGCCGAAGCCGAAGGAGGAACCGGTTATGTTACCCCAGTTCGTAGTGGATGGATCGACCCGGATTTCATCGCAGCCCCGGTGTTTCAAGTTTGAGTTGGACAATCTAGAGGGCCATGTGTCGCCGGAGAAGGTCTGCGGCAGCAACGATACCGAGTGCTTGTCGGTGGAGACCACGGAGGCTTCTTCGGTGGGCCAGGGTGGTGGGGTGGAGTTGGAACTTACCTTGGGGTTTGGGCACGGTCGGATGCTGACGTGTAAAGAGAGGTAG | 726 | 56.75 | MRMSCNGCRVLRKGCSESCSIRPCLQWIKTPQSQANATFFLAKFYGRAGLLNLINAGPDHLRPAIFKSLLFEACGRIVNPIFGSAGLLWSGSWQLCQDAVEAVLNGAPIPPVSYEMATSHMGPPLKGCDIRHVSKQQGSGLSEIKKRRRFKRKPKPKEEPVMLPQFVVDGSTRISSQPRCFKFELDNLEGHVSPEKVCGSNDTECLSVETTEASSVGQGGGVELELTLGFGHGRMLTCKER | 241 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
10 | 1062938 | 1063778 | + | Carg17921-RA | Car10g00222 | 155124 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Car10g00222 | 241 | ProSiteProfiles | LOB domain profile. | 3 | 109 | IPR004883 | - | |
Car10g00222 | 241 | Pfam | Lateral organ boundaries (LOB) domain | 4 | 102 | IPR004883 | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Car10g00222 | Car11g00244 | CST |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Car01g00353 | Car-Chr1:2001161 | Car10g00222 | Car-Chr10:1062938 | 2.12E-80 | dispersed | |
Car10g00222 | Car-Chr10:1062938 | Car14g00743 | Car-Chr14:4170324 | 5.27E-84 | dispersed | |
Car10g00222 | Car-Chr10:1062938 | Car11g00244 | Car-Chr11:1370866 | 2.73E-78 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
4151 | PF03195 | LOB | 7.40E-22 | No_clan | Car | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Car10g00222 | - | - | cmo:103494123 | 374.785 |