Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car10g00222 ATGCGTATGAGCTGCAACGGATGCCGAGTTCTTCGCAAAGGCTGCAGTGAGAGCTGCTCCATCAGACCCTGTCTTCAATGGATCAAAACCCCTCAATCCCAAGCCAACGCTACTTTCTTCCTCGCCAAATTCTACGGCCGAGCTGGCCTTCTTAACCTCATCAATGCCGGCCCCGACCATCTCCGCCCTGCTATTTTTAAATCTTTGCTGTTCGAGGCGTGTGGCCGGATTGTCAATCCGATCTTCGGGTCGGCCGGATTGTTGTGGTCCGGGAGTTGGCAGCTGTGTCAGGACGCCGTGGAAGCCGTTCTAAATGGCGCACCGATTCCGCCGGTTTCTTACGAGATGGCGACGTCCCACATGGGCCCACCTTTGAAAGGCTGCGACATCCGCCACGTGTCCAAACAGCAAGGCTCCGGTCTCAGTGAGATAAAGAAGCGGCGGAGGTTCAAGCGCAAGCCGAAGCCGAAGGAGGAACCGGTTATGTTACCCCAGTTCGTAGTGGATGGATCGACCCGGATTTCATCGCAGCCCCGGTGTTTCAAGTTTGAGTTGGACAATCTAGAGGGCCATGTGTCGCCGGAGAAGGTCTGCGGCAGCAACGATACCGAGTGCTTGTCGGTGGAGACCACGGAGGCTTCTTCGGTGGGCCAGGGTGGTGGGGTGGAGTTGGAACTTACCTTGGGGTTTGGGCACGGTCGGATGCTGACGTGTAAAGAGAGGTAG 726 56.75 MRMSCNGCRVLRKGCSESCSIRPCLQWIKTPQSQANATFFLAKFYGRAGLLNLINAGPDHLRPAIFKSLLFEACGRIVNPIFGSAGLLWSGSWQLCQDAVEAVLNGAPIPPVSYEMATSHMGPPLKGCDIRHVSKQQGSGLSEIKKRRRFKRKPKPKEEPVMLPQFVVDGSTRISSQPRCFKFELDNLEGHVSPEKVCGSNDTECLSVETTEASSVGQGGGVELELTLGFGHGRMLTCKER 241
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 1062938 1063778 + Carg17921-RA Car10g00222 155124
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car10g00222 241 ProSiteProfiles LOB domain profile. 3 109 IPR004883 -
Car10g00222 241 Pfam Lateral organ boundaries (LOB) domain 4 102 IPR004883 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car10g00222 Car11g00244 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car01g00353 Car-Chr1:2001161 Car10g00222 Car-Chr10:1062938 2.12E-80 dispersed
Car10g00222 Car-Chr10:1062938 Car14g00743 Car-Chr14:4170324 5.27E-84 dispersed
Car10g00222 Car-Chr10:1062938 Car11g00244 Car-Chr11:1370866 2.73E-78 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
4151 PF03195 LOB 7.40E-22 No_clan Car TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car10g00222 - - cmo:103494123 374.785