Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car10g00270 ATGGAAGTCAATACCCACAGTAATATGTTACACAAAATTCTCTGTCAACAGAAAAAAATTGCAGTTTTAGCACTTCTGATCTTTACAGCTTTCTATTCAGCTGGGGCTTACGATCCATTGGATCCAAATGGAAACATAACAATCAAATGGGATATAGTATCTTGGGCGGCAGATGGATATGTTGCTGCAGTGACAATGAACAACTTTCAGATGTACCGCCATATTAATGCACCAGGATGGACTCTAGGCTGGTCGTGGGCCAAGAAAGAAGTAATATGGTCGATGGTGGGAGCTCAGACAACAGAGCAAGGAGATTGTTCCAAGTTCAAAGGAAATGTGCCTCACTGCTGCAAGAAAACCCCAGTTGTTGTTGATTTGCTCCCTGGTGTTCCTTACAATCAGCAATTCTCAAATTGCTGCAAGGGTGGAGTGTTGGCATCTTGGGGACAGGATCCAGTAGGTTCCGTCTCCGCCTTTCAGGTGAGTGTTGGGCTAGCCGGCACTTCAAACAAAACTGTAAAATTGCCAAAGAACTTCACCCTGCTCGGTCCAGGACCAGGCTACACATGTGGACCTGCAAAGGTTGTGCCTTCTACAGTCTTCCTCACTCCTGATCGCCGCCGGAAAACTCAAGCACTGATGACATGGAATGTAACCTGCACTTACTCACAATTTCTGGCCTCTAAGAACCCAACTTGCTGCGTATCACTTTCAACTTTCTACAATGAGACGATCACCTCTTGCCCAACCTGCGCCTGTGGCTGCCAACACAAACATAATTGTATAAAGAGTGACTCAAAGCTATTGCACAAGGAAGGAATAAACACTCCTAAAAAGGATAACACACCTTTACTACAATGCACTCATCACATGTGTCCTATTCGAGTACACTGGCACGTAAAGATTAATTACAAGGATTACTGGCGTGTGAAGGTTGCTGTCACTAACTTCAACTATAGGATGAACTATACACTGTGGACACTGGCAGTGCAGCATCCAAATCTGAACAATGTAACTCAAGTCTTTAGTTTTGACTACAAGCCCCTTGTTCCCTATGAATCCATCAACGATACCGGCATGTTCTATGGCATGAAATTCTACAATGATCTATTAATGGAAGCAGGGCCATTTGGAAATGTACAATCTGAAGTACTATTGAAGAAGGATAAGGATACCTTTACCTTCAAGCAGGGTTGGGCATTTCCTAGAAAAGTATACTTCAATGGCGACGAATGTCAGATGCCACCACCAGAATCGTACCCGTTTCTACCCAACTCTGCGCCTGGAGGCTCGAGTGCAGTAGCCAAATTCACCGCCACTTTGCTTTTGATACTCTGGTTTTTGTTGTAA 1350 44.22 MEVNTHSNMLHKILCQQKKIAVLALLIFTAFYSAGAYDPLDPNGNITIKWDIVSWAADGYVAAVTMNNFQMYRHINAPGWTLGWSWAKKEVIWSMVGAQTTEQGDCSKFKGNVPHCCKKTPVVVDLLPGVPYNQQFSNCCKGGVLASWGQDPVGSVSAFQVSVGLAGTSNKTVKLPKNFTLLGPGPGYTCGPAKVVPSTVFLTPDRRRKTQALMTWNVTCTYSQFLASKNPTCCVSLSTFYNETITSCPTCACGCQHKHNCIKSDSKLLHKEGINTPKKDNTPLLQCTHHMCPIRVHWHVKINYKDYWRVKVAVTNFNYRMNYTLWTLAVQHPNLNNVTQVFSFDYKPLVPYESINDTGMFYGMKFYNDLLMEAGPFGNVQSEVLLKKDKDTFTFKQGWAFPRKVYFNGDECQMPPPESYPFLPNSAPGGSSAVAKFTATLLLILWFLL 449
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 1288557 1291055 + Carg17873-RA Car10g00270 155172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car10g00270 449 Pfam COBRA-like protein 60 223 IPR006918 GO:0010215|GO:0031225
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car10g00270 Car11g00198 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car10g00270 Car-Chr10:1288557 Car11g00198 Car-Chr11:1141442 0 dispersed
Car16g00854 Car-Chr16:6258208 Car10g00270 Car-Chr10:1288557 5.18E-28 dispersed
Car10g00270 Car-Chr10:1288557 Car10g00271 Car-Chr10:1291713 0 tandem
Car10g00270 Car-Chr10:1288557 Car11g00197 Car-Chr11:1137936 0 wgd
Car10g00270 Car-Chr10:1288557 Car13g00898 Car-Chr13:9356004 2.99E-98 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car10g00270 - - cmo:103494059 891.338