Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car10g00278 ATGTTGAGAAACTCAAAAGAAAAGGGTTTTGAATCAAAAGAAGAAGGAAAATATAGGTTCCCCAAGGCTCCAACAAGCTCTAGGCAATGGTCAGGGTTTAGAAACCCAAGAATTGTGAGAGTTTCTCGTTCATTTGGTGGCAAAGATAGACATAGCAAAGTTTGTACCATTAGGGGCTTGAGAGATAGAAGGATAAGGCTATCAGTGCCTACCGCCATTCAACTCTATGATCTTCAAGACAAGCTCAAACTTGGCCAACCTAGTAAGGTCATCGACTGGCTCCTCGACGTCACCAAGCTCGATATCGACAAGCTCCCGCCGTTGCAAATCCCAACCGGGTTCTCTCCGTTTCACCAACAGATGCTTTTCCCTCCATATGATCATCATCATCATTATTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCCCAATTTTGTAACTCACTCCCTCTGCCCTTCGCCGTCGACATGAAAGGCGATTCTATCGAGAAAACGAAGATTTGGGATATGGATTTAGCGTTACAAGGAAAAGCTTCTTCATTAACCAAAGGGAAGTGGATTGATGGAAGTAGTAATCAACATGTAGAAGATTACAATTTTACACCTTACAATACTTACAATTCTTCTCAATTTGGGAACAATAATGGAGTTTTTCCATCACAAATTGAGGCTCCAACGAGTTCATCTTCTGCTTCTGCACTCTTCTTTACACCCTATGCTTCATATATTACCAACCCATTTGAAAGCCATATCCATTTCTTGAGCTCAAATTCCCATGCTTTGTCCAATCCCTTTGTGCCTTCAGCTCTCCACCCTTTTGCTTCACAGAACTTGAAACCCTTTTCAGCTGCAAGCTTCAACTTCAAGCAGCTTCTTCATGCAGCTGATGGTAATGGCGCCGACCGCTCCAATAAAGATGGGACGGCTGGTGACTCATAG 939 42.71 MLRNSKEKGFESKEEGKYRFPKAPTSSRQWSGFRNPRIVRVSRSFGGKDRHSKVCTIRGLRDRRIRLSVPTAIQLYDLQDKLKLGQPSKVIDWLLDVTKLDIDKLPPLQIPTGFSPFHQQMLFPPYDHHHHYSSSSSSSSSSSQFCNSLPLPFAVDMKGDSIEKTKIWDMDLALQGKASSLTKGKWIDGSSNQHVEDYNFTPYNTYNSSQFGNNNGVFPSQIEAPTSSSSASALFFTPYASYITNPFESHIHFLSSNSHALSNPFVPSALHPFASQNLKPFSAASFNFKQLLHAADGNGADRSNKDGTAGDS 312
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 1325296 1326234 - Carg17865-RA Car10g00278 155180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car10g00278 312 ProSiteProfiles TCP domain profile. 47 105 IPR017887 -
Car10g00278 312 MobiDBLite consensus disorder prediction 1 21 - -
Car10g00278 312 MobiDBLite consensus disorder prediction 1 29 - -
Car10g00278 312 Pfam TCP family transcription factor 47 165 IPR017887 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car10g00278 Car13g00905 CCT
Car10g00278 Car11g00191 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car10g00278 Car-Chr10:1325296 Car20g00876 Car-Chr20:8359926 5.81E-44 dispersed
Car10g00278 Car-Chr10:1325296 Car11g00191 Car-Chr11:1099966 1.41E-134 wgd
Car10g00278 Car-Chr10:1325296 Car13g00905 Car-Chr13:9396352 8.57E-40 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
4159 PF03634 TCP 1.70E-24 No_clan Car TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car10g00278 - - csv:101218680 408.683