Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car10g00290 ATGGCGACGCCGTTGACAGGGCTACATCACAGGGACGGTGGCGGAGGGGTGGCTTTTTTGGCTAATTCTGTTAATAAAATGGATTCCGCGTCGTCTCCGTCGTCGCCGAATGATTGTTTGAGGAGCTCCGAGCCACAGTCTCCGATTCTTATTTTCCTTTTCTTCCACAAAGCTATTCGGAAAGAGCTCGATACGCTACACCGGCTGGCCATGGCATTTGCCATCGGCCAGAGAGCAGATATTCGGCCGCTATTTGAACGATATCATTTTCTTAGATCGATTTACAAGCACCACTCCAATGCTGAAGACGAGGTAATTTTTCCTGCACTTGATATTCGTGTGAAGAATGTGGCACAGACATATTCCCTTGAACACAAGGGTGAAAGCAATCTATTTGATCAACTTTTTGAGCTTCTTAATTCCAATACACGAAATGATGAAAGCTTCCCAAGGGAGTTAGCGTCCTGCACTGGTGCCCTAAAGACATCTGTGAGCCAGCACATGGCTAAGGAAGAAGAGCAGGTATTTCCCTTGCTTATAGAAAAGTTCACATTGGAAGAGCAGGCATCTCTCGTTTGGCAGTTCTTCTGCAGTATTCCTGTGTACATGATGGCTCAATTCCTCCCTTGGATTTCTTCATCTGTTTCACCTGATGAATTTCAGGATCTACAGAAATGTTTAACTAATATAGTCCCCGAGGAAAAGCTTCTTCAACAGGTCATATTTACTTGGATGGAAGAGAGAAGTTGTGACACCGTATCAACAAGTTGCTTTGATGATTCTCCAGTTGTACATCATTCAGATCCTACTACTCATACATCAAATCATCAAACAGGAAATGTAAATTGTGCTTGTGCATTGACCAGCCATGGGAAAAGGAAATATTTGGAGTCCAGTTCTGATACATCAGATTATGTGATAACTCATCCAATTAATGAAATACTGTTTTGGCATAATGCCATCGAAAGGGAGTTGAATGACATAGCTGAGGAGGCTAGGAAGATACAATTTTCTGGGAAGTTTAGTAATCTATCAACTTTTAACGAGAGGTTGCAATTCATTGCTGAAGTTTGCATTTATCATAGTATTGCTGAGGACAAGGTAATCTTTCCTGCAGTAGATGGAGAGTTTTCTTTTTTCCAGGAACATGCTGAAGAAGAAAGTCAATTCAATGAGTTTAGTTGCCTGATTGAAAATATTCAAAGGGCAGGGGCTAGTTCTACTTCAAGAGATGAATTTTACGTGAAGTTGTGTTCTCATGCTGATCAAATAATAGATACCATTAAGAGGCACTTCCATAATGAAGAAGTTCAGGTTCTTCCACTTGCTAGAAAGCACTTTAGTTGCAAGAGACAACGGGAATTGTTGTATCAAAGTTTGTGTATGATGCCTTTGAAATTGATTGAACGAGTCTTGCCATGGCTGGTAGGATCATTAAAAGAAGATGAGGCTAGAGATTTTCTCAAGAACATGCAGTTGGCAGCTCCAGCTAAAGATACTGCTTTGGTGACTCTCTTTTCTGGTTGGGCTTGCAAGGCCCGCAATAATGGTTTGTGCATATCTTCAAGAGCAGTTGGCTGTTGTGCAGTTCAAAGGTTACCTGATATTGAAGAAGACACTGTTCAATCGCCTTGTTCATGTGCCCCTGCATTGATTGCAAGGGAAGGTCCAAAATCCGATCCAGAAGAAACTAATGTTCATGTTAAGAGGCCAGCCATACGGAATGTTCCTATGTCATGCAGACTTTGTGATGGCCGTATTGCTTCAGAGACTGTTAATGTCCAGCAACAGTGTTGTAGTGATCAGTCCTGCCGTGTTCCAGCTTTAGGAGTAAACAGCAAGAATCTGGGGTTAAGTTCTATTTTCTCATCCAAGTCTATGCGATCCTTATCTCCCAGCTCTTGTGCACCTTCTCTCAATTCCAGCCTTTTTTCATGGGAAACAGATAATGCCACTTCTGATGTTGGGTCTGCAGGACGTCCCATTGATACTATTTTTAAATTTCACAAAGCGATACGCAAAGACTTGGAATATTTAGATGTTGAATCTGGAAAACTTGGTGATTGTGATGGAACATTTCTCCGGCAATTTATTGGAAGATTTCGTCTTCTATGGGGGTTATATCGCGCTCATAGTAATGCTGAAGATGATATTGTATTTCCTGCTCTGGAATCCAAAGAGACATTGCACAATGTAAGTCACTCATATACGCTCGACCATAAGCAGGAGGAAAAACTATTTGAGGATATTTCATGTGTTCTCTCTGAGATTTCACTCCTCCATGAAAGTCTGCATGAGGTTCAGTTAGATGAGAGTCATTCTAGAAGTGATGTAGGTTCTGTTAATATGGCGGGGAAGGATTGTAATAGAATGTACAACGAGCTTGCTACAAAGCTTCAAGGAATGTGCAAATCTATAAGAGTTACCCTGGATCAGCATATTTTTAGGGAAGAACTTGAGCTTTGGCCGCTGTTTGGGAAACACTTTTCCTTCGAGGAGCAAGACAAAATAGTTGGTCGTATTATTGGGACAACAGGTGCTGAAGTTCTCCAGTCAATGTTGCCATGGGTAACATCTGCACTTACTCAAGACGAACAGAATACCATGATGGATACGTGGAAGCAGGCCACGAGAAACACCATGTTCAACGAATGGCTCAACGATTGTTGGAGAGGGACTGCTTCGTCTACTTTAAATGGTGAAACATCGGAAGCTTGTGTTGCTGAGAAAGATTCTGGGCTCATTGAGAGCTTGGATCAGAATGATCAAATGTTCAAGCCTGGCTGGAAAGATATTTTTCGCATGAACCAAAATGAACTTGAATCAGAAATCAGAAAGGTTTATCAGGACTCGACTCTTGATCCAAGGAGAAAAGCATATCTTGTGCAGAATCTTATGACCAGTCGCTGGATTGCTGCACAGCAGAAATTGCCTCAAGCAAATATAGAAGACAATTCCAATGGTGAAGATGCAGCAGGACGAACACCATCTTTTCGCTGTGTCGAGAAAAAGATATTTGGGTGTGAACATTACACTAGAAACTGCAAGCTTCTTGCTGCTTGCTGCGGAAAGTTATTTACTTGTCGATTTTGTCATGATAATGTCAGCGATCACTCAATGGACAGGAAAGCAACATCAGAGATGATGTGTATGAACTGTCTAACAATTCAAGCAGTTGGGCCAGTATGCACTACACCTTCTTGCAATGGATTATCAATGGCGAAATACTATTGCAATATTTGTAAATTTTTTGATGATGAAAGGACTGTGTATCATTGCCCATTTTGCAACTTATGCCGTGTTGGGAAGGGTCTTGGAATTGATTTTTTCCATTGCATGATTTGCAATTGTTGCCTTGGGATAAAGCTGGAGAGTCACAAGTGCCTGGAGAAAAGTTTAGAAACGAATTGTCCCATCTGTTGTGATTTCTTATTTACATCCAGTGCAACAGTCAGACCGCTACCCTGTGGTCATTACATGCATTCAGCTTGCTTTCAGGCCTACACTTGCAGCCATTATACCTGTCCTATTTGCAGCAAGTCCTTGGGAGATATGGCGGTTTATTTTGGCATGCTTGATGCCTTGTTGGCTGCTGAGGAGCTGCCAGAGGAGTACAGGGAACGTTGCCAGGACATACTGTGCAACGACTGTGAACGGAAAGGCACATCGCGGTTCCATTGGCTATATCATAAATGCGAGTTCTGCGGATCATACAACACCCGGGTAATCAAGAACGATGCCGCATATGCCGCTGAATGCCCCTCTTCCAATCAGTGA 3777 42.28 MATPLTGLHHRDGGGGVAFLANSVNKMDSASSPSSPNDCLRSSEPQSPILIFLFFHKAIRKELDTLHRLAMAFAIGQRADIRPLFERYHFLRSIYKHHSNAEDEVIFPALDIRVKNVAQTYSLEHKGESNLFDQLFELLNSNTRNDESFPRELASCTGALKTSVSQHMAKEEEQVFPLLIEKFTLEEQASLVWQFFCSIPVYMMAQFLPWISSSVSPDEFQDLQKCLTNIVPEEKLLQQVIFTWMEERSCDTVSTSCFDDSPVVHHSDPTTHTSNHQTGNVNCACALTSHGKRKYLESSSDTSDYVITHPINEILFWHNAIERELNDIAEEARKIQFSGKFSNLSTFNERLQFIAEVCIYHSIAEDKVIFPAVDGEFSFFQEHAEEESQFNEFSCLIENIQRAGASSTSRDEFYVKLCSHADQIIDTIKRHFHNEEVQVLPLARKHFSCKRQRELLYQSLCMMPLKLIERVLPWLVGSLKEDEARDFLKNMQLAAPAKDTALVTLFSGWACKARNNGLCISSRAVGCCAVQRLPDIEEDTVQSPCSCAPALIAREGPKSDPEETNVHVKRPAIRNVPMSCRLCDGRIASETVNVQQQCCSDQSCRVPALGVNSKNLGLSSIFSSKSMRSLSPSSCAPSLNSSLFSWETDNATSDVGSAGRPIDTIFKFHKAIRKDLEYLDVESGKLGDCDGTFLRQFIGRFRLLWGLYRAHSNAEDDIVFPALESKETLHNVSHSYTLDHKQEEKLFEDISCVLSEISLLHESLHEVQLDESHSRSDVGSVNMAGKDCNRMYNELATKLQGMCKSIRVTLDQHIFREELELWPLFGKHFSFEEQDKIVGRIIGTTGAEVLQSMLPWVTSALTQDEQNTMMDTWKQATRNTMFNEWLNDCWRGTASSTLNGETSEACVAEKDSGLIESLDQNDQMFKPGWKDIFRMNQNELESEIRKVYQDSTLDPRRKAYLVQNLMTSRWIAAQQKLPQANIEDNSNGEDAAGRTPSFRCVEKKIFGCEHYTRNCKLLAACCGKLFTCRFCHDNVSDHSMDRKATSEMMCMNCLTIQAVGPVCTTPSCNGLSMAKYYCNICKFFDDERTVYHCPFCNLCRVGKGLGIDFFHCMICNCCLGIKLESHKCLEKSLETNCPICCDFLFTSSATVRPLPCGHYMHSACFQAYTCSHYTCPICSKSLGDMAVYFGMLDALLAAEELPEEYRERCQDILCNDCERKGTSRFHWLYHKCEFCGSYNTRVIKNDAAYAAECPSSNQ 1258
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 1392582 1401596 - Carg15157-RA Car10g00290 155192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car10g00290 1258 Pfam Hemerythrin HHE cation binding domain 661 824 IPR012312 -
Car10g00290 1258 Pfam Hemerythrin HHE cation binding domain 53 179 IPR012312 -
Car10g00290 1258 Pfam Hemerythrin HHE cation binding domain 310 443 IPR012312 -
Car10g00290 1258 Pfam CHY zinc finger 1008 1083 IPR008913 GO:0008270
Car10g00290 1258 Pfam Zinc-ribbon 1184 1241 IPR039512 -
Car10g00290 1258 ProSiteProfiles Zinc finger CHY-type profile. 1001 1070 IPR008913 GO:0008270
Car10g00290 1258 ProSiteProfiles Zinc finger RING-type profile. 1137 1179 IPR001841 -
Car10g00290 1258 ProSiteProfiles Zinc finger CTCHY-type profile. 1073 1136 IPR017921 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car10g00290 Car11g00258 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car04g01550 Car-Chr4:9003448 Car10g00290 Car-Chr10:1392582 0 dispersed
Car10g00290 Car-Chr10:1392582 Car11g00259 Car-Chr11:1431845 2.62E-07 dispersed
Car10g00290 Car-Chr10:1392582 Car11g00258 Car-Chr11:1423895 3.19E-19 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car10g00290 K16276 - csv:101215023 2346.62