Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car10g00299 ATGGATGGTTCAAAACTAAGGCCGGTAGACCCATCAAGTCCAAGCAACTCGAGAAGGGTAAAAAGACCCGTGAACTCACTCAAACTAAAGGTGAGGAGTGCGGGGTTGGGGCATCTACCTAATGAGGAAGGGGACTTCTCGAGTCGACCATGGGTAAGATTGCATATTGAAGTCCCTCTTGATTTTGGTCTTGATCGATTAACGCTTCTCCGCCATCTTCAAGCGCCAAACCCTCGAATTTCGCAACCCCGAAGAGACTTAGGAATCTGTGTTGATTCAAAGCGGGGAAGACCTGCTTCCTTCTGCGCTTGTCGAGTCGCTTCCCATTTCGCCTCTTCCCTTTTGAAGTTATGGGAATTTCGAGTTTTCGCGCCTTATCGTGGATTTGCGCGTTTCTCCATCTCTTTTCCTTCTAGGGATTTCTGGAAAAGGTATAAGAGGAAGATTTTAATTACAGCTGGAGTTTTAGGAAGCGGGTATTTTCTGTACCGACAATATGATTATTACAGTCGAAGGCTTCATGATATCCAGAAAGAGTTGGATAATGAACGTGAAGCAGATGAGCTCATTAAAGCTCAAATACAAGCTCATTTTGAGAACATTCAAAGAATAGCTGATACTACGACATTGCCTCATGCTTTACAACATTTACATAATCGGATAGAGGAAGATTTGGATCTTTCACACCTGACAGAGAGATTAATGATGGGGAAGGGCGAGCCAAACACTTTGACATTAGCTGAGAAACTTGATTTATGGGAAAACCTCAAAATACTAAGCTTCACAAAGATGGTGATATCACTCTGGGCAATAACTGTGTTAAGTTTGTACATTAGAGTTCAAGTCAACATCTTAGGAAGACATATGTACATCGATACTGCCCGTGGTATTGGTAGCTCCCAGTTGCTTGAGGAGGCTGATCTCATCAATAGAGAAGACCAACAGAAATTTCTGGCCATCTCTGATTTTCTCTGTAATTATGGTCTGAATGCCTTGATTCCTAGATTGCAGGTCGCAGTCGGAGAAGTTCTCAAGAGAAAACAGTTGCGAGATGTCTTTAATACAACCGTACTTCGTGACACTACTACACAAATAATTAAAATTTTCATGAGCACAGGAAGTCCCCATCATTGGTTGGACTACTTGATGCCTGGGGACAATCAATCTAATATTACGGACACGCTCTCCACTGACGACGATGCAGCTGCCCGAAATTTCAACAAGTTTGATCAGCTCATGATGGAGACTAGAGCAGTACTGCTAAGTGCCGAGTTCGGGAGCGTCGTCGAGAGATCGTTAGAAGTGGGAGTCGATGGGTTGATGGACGAAATGGAGGGTTCAGTTGCTGGAGGCAGCAGCAGAACATCAGGAATACCCCTGGCTAGGCTTGTGCCAAGAGTGGCCCAGATGGGGCTATTGCTCCTTGAAGATCCACTAAAAAGTAGATTCATCAAAACGATAAGAGCAATGGTTGAGCTCGATCCATCAAAGAAAGTGGCCGATAGATATTTAAAGCGTGAGGTTCTCGGGGAGGGTACCTATGGTGTTGTATATAAGGCTATTGATACTCAGATTGCTATGGCAGCCATGGCGACTGCTTCTGGGGCTATTTGGGGTATTTCTTCGAGTTTTATCACTTTGGCTATGTTTCAATGTGGTGGAGTACCTGGTGCTTTTGCCCTAAGATTCAAATTTGTTTTCCTGAACTGTATCTCACGTCAGACGGTTGCAATCAAGAAAATTCGGCTTGGGAAACAAAAAGAGGGAGTAAATTTTACGGCTCTTCGAGAAATCAAGCTGCTTAAAGAGCTCAAATATCCAAATATAATTGAGTTAATTGATGCATTCCCTCACAAAGGAAATTTGCATCTTGTATTTGAGTTTATGGAGACAGACCTTGAAGCTGTTATACGTGATCGAAACATATTTCTTTCCCCAGCTGACATAAAATCATTCCTTCAGATGACGTTGAAAGGACTTGCTTATTGCCACAAGAAATGGGTTTTACATAGGGATATGAAGCCAAATAATTTGTTGATAGGATCAAATGGTCAACTGAAACTTGCAGATTTTGGTTTGGCTCGGATATTTGGGAGTCCGGATCGTAGATTTACTCACCAGGTGTTTGCTCGATGGTACAGAGCGCCTGAGCTATTGTTTGGCACTAAGCAATATGGCTCTGCAGGTTCAAGTGACATTGACCAATTGGGGAAGATCTTTGCAGCTTTTGGAACACCAACGCCTTCTCAATGGCCTGATATGTTATACCTACCTGATTACGTGGAGTTCCAATATGTTCCTGCCCCTCCCCTACGATCATTGTTTCCTATGGCTAGTGATGACACGCTGGATCTCCTATCAAAGATGTTTGCATATGATCCAAAATCTAGAATTACCATTCAACAAGCATTGGAGCATAGATACTTCTCATCTGCACCACTTCCCACAGATCCTAGTAAGCTTCCAAGGCCTACTTCAAAGCAAGAACCTACGAACTCTCGAGGTTTGGACTTAAATTCAAATGAGGCTCCTAACTCTCCTCCAAGAAAGTCGAGAAGAGTAATGTCAGATCGTGAGGCTTTTGAAGGAAATGCATATAAATCTGATAGGCTTGATGACCATGTTAGTGAGCGAGAGGCAGCTGCTGGAAATACAAGCAAGAATGAAGCAGTGCCTATGTCGTTGGATTTTTCTGTTTTTGGTGGAAAACCTCCAAATAGACCTACAATTAACAGTGCTGACAGATCACATCTTAAAAGGAAATTAGATCTTGAATTCCAACAATAA 2787 42.84 MDGSKLRPVDPSSPSNSRRVKRPVNSLKLKVRSAGLGHLPNEEGDFSSRPWVRLHIEVPLDFGLDRLTLLRHLQAPNPRISQPRRDLGICVDSKRGRPASFCACRVASHFASSLLKLWEFRVFAPYRGFARFSISFPSRDFWKRYKRKILITAGVLGSGYFLYRQYDYYSRRLHDIQKELDNEREADELIKAQIQAHFENIQRIADTTTLPHALQHLHNRIEEDLDLSHLTERLMMGKGEPNTLTLAEKLDLWENLKILSFTKMVISLWAITVLSLYIRVQVNILGRHMYIDTARGIGSSQLLEEADLINREDQQKFLAISDFLCNYGLNALIPRLQVAVGEVLKRKQLRDVFNTTVLRDTTTQIIKIFMSTGSPHHWLDYLMPGDNQSNITDTLSTDDDAAARNFNKFDQLMMETRAVLLSAEFGSVVERSLEVGVDGLMDEMEGSVAGGSSRTSGIPLARLVPRVAQMGLLLLEDPLKSRFIKTIRAMVELDPSKKVADRYLKREVLGEGTYGVVYKAIDTQIAMAAMATASGAIWGISSSFITLAMFQCGGVPGAFALRFKFVFLNCISRQTVAIKKIRLGKQKEGVNFTALREIKLLKELKYPNIIELIDAFPHKGNLHLVFEFMETDLEAVIRDRNIFLSPADIKSFLQMTLKGLAYCHKKWVLHRDMKPNNLLIGSNGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGTKQYGSAGSSDIDQLGKIFAAFGTPTPSQWPDMLYLPDYVEFQYVPAPPLRSLFPMASDDTLDLLSKMFAYDPKSRITIQQALEHRYFSSAPLPTDPSKLPRPTSKQEPTNSRGLDLNSNEAPNSPPRKSRRVMSDREAFEGNAYKSDRLDDHVSEREAAAGNTSKNEAVPMSLDFSVFGGKPPNRPTINSADRSHLKRKLDLEFQQ 928
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 1460610 1469985 - Carg15166-RA Car10g00299 155201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car10g00299 928 MobiDBLite consensus disorder prediction 821 847 - -
Car10g00299 928 Pfam Protein kinase domain 572 809 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car10g00299 928 MobiDBLite consensus disorder prediction 811 917 - -
Car10g00299 928 Pfam Peroxin-3 244 454 IPR006966 GO:0005779|GO:0007031
Car10g00299 928 Pfam Peroxin-3 141 238 IPR006966 GO:0005779|GO:0007031
Car10g00299 928 MobiDBLite consensus disorder prediction 851 880 - -
Car10g00299 928 ProSiteProfiles Protein kinase domain profile. 503 809 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car10g00299 928 ProSitePatterns Serine/Threonine protein kinases active-site signature. 668 680 IPR008271 GO:0004672|GO:0006468
Car10g00299 928 MobiDBLite consensus disorder prediction 1 24 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car10g00299 Car11g00272 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car10g00299 Car-Chr10:1460610 Car18g00857 Car-Chr18:9596081 1.50E-64 dispersed
Car11g00275 Car-Chr11:1507749 Car10g00299 Car-Chr10:1460610 4.70E-132 transposed
Car10g00299 Car-Chr10:1460610 Car11g00272 Car-Chr11:1498123 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
89120 PF00069 Pkinase 2.00E-50 CL0016 Car PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car10g00299 K02202 - csv:101217645 699.123