Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Car10g00305 | ATGACCGGCGGCGATCAAGACCACGAGCCTGAAAAATGTGGCAACGCCACCAATCACCAACAAAGACCTGCCTCCTTTGATCCCTCTTCTCTTGTCTCTCCCAAGGCTGTGCCGCCCATCTCGGCGGCACCGGACACCGATCATGCTCTCCGCCGCCCGCGGGGCCGCCCTGCCGGGTCCAAAAATAAGCCTAAACCCCCAATTATTGTTACTCGTGATAGCGCCAATGCGCTTCGAGCTCATGCGATTGAGGTTAGTTCTGGGTGCGATGTCAATGAGAGCCTCTCGAACTTCGCTCGAAGGAAGCAGCGTGGCGTCTGCATTCTTAGTGGGAGTGGGTGCGTCACTAATGTCACGCTCCGCCAAGCTGCCTCCTCTGGCGCCATTGTTACTCTTCATGGACGTTTCGAGATCCTTTCAATGTTGGGGTCGATTCTTCCACCACCAGCACCGTCCGGGATCACTGGACTGACGATTTACTTGGCCGGCGCACAAGGGCAGGTGGTCGGTGGAGTTGTGGTGGGTGCGCTCATTGCTTCCGGTCCAGTCGTGATCATGGCGGCGACGTTCATGAACGCAACATTTGACCGCCTGCCGTCGGACGACGAAGAAGTGGCAAGCGCTATACAGAGCCAACACTACGGCCAACATGGACGGAGCCACCACCACGTGGATGTGTCGGATCTGTATGGCGTGCCGCAGAATTTGATCACCAACAGCGCACTTCCGCCGGAATTGTACTCTTGGGCGGCGGCGGGCAGAACCATGTCAAAGACTTGA | 780 | 57.44 | MTGGDQDHEPEKCGNATNHQQRPASFDPSSLVSPKAVPPISAAPDTDHALRRPRGRPAGSKNKPKPPIIVTRDSANALRAHAIEVSSGCDVNESLSNFARRKQRGVCILSGSGCVTNVTLRQAASSGAIVTLHGRFEILSMLGSILPPPAPSGITGLTIYLAGAQGQVVGGVVVGALIASGPVVIMAATFMNATFDRLPSDDEEVASAIQSQHYGQHGRSHHHVDVSDLYGVPQNLITNSALPPELYSWAAAGRTMSKT | 259 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 10 | 1501563 | 1502424 | - | Carg15172-RA | Car10g00305 | 155207 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Car10g00305 | 259 | Pfam | Plants and Prokaryotes Conserved (PCC) domain | 79 | 191 | IPR005175 | - | |
| Car10g00305 | 259 | MobiDBLite | consensus disorder prediction | 1 | 68 | - | - | |
| Car10g00305 | 259 | MobiDBLite | consensus disorder prediction | 1 | 15 | - | - | |
| Car10g00305 | 259 | ProSiteProfiles | PPC domain profile profile. | 75 | 212 | IPR005175 | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Car10g00305 | Car-Chr10:1501563 | Car04g01075 | Car-Chr4:6193419 | 3.25E-66 | dispersed | |
| Car10g00305 | Car-Chr10:1501563 | Car11g00279 | Car-Chr11:1529945 | 1.32E-120 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Car10g00305 | - | - | cpep:111779804 | 499.204 |