Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car10g00344 ATGGCGGTGGATCTGGCAGTGTTTCCGGCGAAGATGGAGGATCATACGGCGATTCTAGAAGCCTCCTCCGCCGGTTTACAGAGCATGGAGCATCTAATCCGCCTCTTATCCAAACAGCCCTCTCAAACCCCTAATTGCTCTGAAATCGCCGATTTCACCGTCTCCAAATTCAAGCGCCTAATTTCCCTCTTGAACAGAACCGGCCACGCTAGATTCCGTCGCGGACCTTCCGATTCCCCAAATCCCCTCCCCAATTCCCCCAATCCAACCTCCAAAATCGATTGCCCTAACCCTAATTTCACCCCTGTCGCCAAATCCCCTGATTCTAGGGCTCCGACTGACTCCACCACGACCTCGTCTTTTGTCTCCACTATCACCGGCGACGGCAGCGTTTCACTCTTTGCGACTCCGGCAGTCTCCTCCGGTAAGCCGCCGCTGTCGGTGAAGAGGAAGTCCGATGACAGATCTCGATTTGGCTGCAAGACTCCTTCCAAGCCCTGTCACTGTGCGAAGCGAAGGAAATCTGGGGTGAAAAAAACGGTACGAGTCCCGGCGATCAGTTCTAAAATCGCCGACATACCTCCCGATGAATACTCTTGGAGAAAGTACGGCCAAAAGCCCATTAAAGGCTCCCCCTATCCTAGAGGGTATTATAGATGCAGCACCGTCAAAGGTTGTCCGGCGAGGAAAAAGGTGGAAAGAGTTCGTGACGATCCGACCATGCTCCTCGTAACATACGACGGGGACCACCGTCACCCGCAGCCTCCGGTGACCCATCTTAACGTGGGTGTCGTTTCCCAGAAATCTTGA 810 53.83 MAVDLAVFPAKMEDHTAILEASSAGLQSMEHLIRLLSKQPSQTPNCSEIADFTVSKFKRLISLLNRTGHARFRRGPSDSPNPLPNSPNPTSKIDCPNPNFTPVAKSPDSRAPTDSTTTSSFVSTITGDGSVSLFATPAVSSGKPPLSVKRKSDDRSRFGCKTPSKPCHCAKRRKSGVKKTVRVPAISSKIADIPPDEYSWRKYGQKPIKGSPYPRGYYRCSTVKGCPARKKVERVRDDPTMLLVTYDGDHRHPQPPVTHLNVGVVSQKS 269
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 1703899 1705439 - Carg15211-RA Car10g00344 155246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car10g00344 269 Pfam Plant zinc cluster domain 152 192 IPR018872 -
Car10g00344 269 MobiDBLite consensus disorder prediction 68 121 - -
Car10g00344 269 Pfam WRKY DNA -binding domain 196 253 IPR003657 GO:0003700|GO:0006355|GO:0043565
Car10g00344 269 MobiDBLite consensus disorder prediction 135 165 - -
Car10g00344 269 MobiDBLite consensus disorder prediction 147 161 - -
Car10g00344 269 ProSiteProfiles WRKY domain profile. 189 255 IPR003657 GO:0003700|GO:0006355|GO:0043565
Car10g00344 269 MobiDBLite consensus disorder prediction 247 269 - -
Car10g00344 269 MobiDBLite consensus disorder prediction 92 121 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car10g00344 Car11g00322 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car10g00344 Car-Chr10:1703899 Car01g01194 Car-Chr1:11055619 3.23E-86 dispersed
Car10g00344 Car-Chr10:1703899 Car11g00322 Car-Chr11:1758429 7.62E-119 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
4163 PF03106 WRKY 3.30E-25 CL0274 Car TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car10g00344 - - bhj:120070667 409.838