Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car10g00371 ATGTTGGTATTAGGAACTGCTCACGATCCATCAAGGTACAGTAAGATGAGTATGGAGGAGAAAAGGAATTTGGTCTATGAAATATCGGATCAGCCAAATGCTTCTGATCTGCTTCAGTCCTGGAGTCGTCATGAGATTTTAGAGATCCTGTGTGCAGAGATGGGGAAAGAGAGGAAATATACTGGATTAACAAAACTGAAAATAATTGAGAACCTTCTGAAAATTGTTAGTGAAAAGAAATCAGGGTCATCTGAGGATGTAACAGATCTTGACAGTCAGTCTTCTCCCTGTGTTTATCCAAAGATTACCAAAAGGCAAAGAAAAATTGATCAGCCAGCACGCCTACCTGTTCCTGCAAACCATATTCCAATCAGTAACACTAGGAGTGACTCAAATATTGCAGTATACTGCAGAAATTCGGCATGCAAAGCTACCTTAAATCAAGAGGATAGATTTTGCAAGAGGTGTTCATGCTGCATTTGTTATCAGTATGATGATAATAAGGATCCTAGTCTATGGTTAAGTTGCAGCTCTGACCCACCATTTCAAGACACTTCATGTGGTATGTCATGCCATCTTGAATGTGCATTGAAGCATGAAAAATCTGGGATTTCTAGAGGACTGCGGGCTGGAATGGAAGGGACCTTTTGTTGTTTATCGTGTGGAAAAGTCAATGACTTGCTTGGGTGTTGGAGAAAACAATTGATGAAGGCAAAGGAAACCAGAAGGGTGGATATACTGTGTTACCGCCTCTCTTTAAGCAAAAAGCTTTTGGTTGAAGTTGAAAAGTATCAAGACGTTCATCAGATTGTGGATGAGGCTGTGAAGAAACTTGAAGCTGAAGTGGGTCCTTTGACTGGTGTACCGGTTGGTACGGGCAGGGGCATTGTTAACAGACTTTCTTCAGGACCAGAGGTTCAGAAACTCTGCTCGTTAGCCATTGATACACTGGACTCCTTGCTCTCCACGAATATCTTGCACCAATTGCCCAGTTCCATAATACAAGATACTAATTTGGTTGGTAACAACTTCGTAAGGTTCGAAGATGTTGATGCAACATACCTTACAGTGGTTGTGGGTACTGAGGATGTTTCATCTGGAAAAACTGCTGGTTACAGGATATGGCATCGAAAGGCATGCGAAATAGATTACCCTATGGAGCCAACTTGCACCTTGTCTCAACTCAATTTGAGGTCTGTCGTCCGAGGGCTGACCCCATCTTCGGAATATTATTTCAAAGCCATTTCCTTTGATGGGACAGGAGATTTGGGGATGTGTGAAGTTCAGGTCTCAACTGCTACTGCTCGGGAGGATAACACAGACTGCTTAGTGACTGAAAGGTGTCAGAGTCCTGTGACCAACTTCAGTGAGCTCTCTAATCCTTCTTCAGTAGAAGATGAAACTAACAATGTCATACCTTGTAGCGACCAGACTGACAGTCGAACAGGGAGCTATCTTTCATATTGCAAGGATTCTAACAAGATCACGACGGCTAACCTGTCTAAGGATGCAATAAACTGCACCGATGTCAGTGGAAGGGGAACAGCAGAAGATTCTGTATCATTGTTGGATGAGGATCACGTCACAAGGAAAAGCTCCATGCTGCCTGATCCCAGTGTTTCAAAACTTGAAGACGGGCATTCCTCTGATGTCCATATCATTGAAGATACCAGCATGAATAACGGGTCAAATTCTGCTATTCAAGAAGGGACTAAATGCGCACCATTTGTTAGCAGCTCTGAGGCTGGATTGCCAGTTACTCCTTGCAAGATGGAAATACTCAAGGATGTTCTTGGAAGGAGTGGTCGATTGAAGTCGTCTAGCGCCAAAGATCGAGAAACTGGGTCGGGAGGAGAGGAACGGCAACATGGCAGAACATCCAAGAAGAGAAGTGCAGAGAGGCAAGATGCTGATTGTGCAGCCAATGGTATCTCAGACAAGGATTTTGAGTATTATGTAAAATTGATTAGATGGCTGGAATGCGAGGGGCACATAGAGAAGAACTTCAGACAAAAATTCTTAACCTGGTACAGCTTGAGAGCCACAGCACAGGATGTTAGGATTGTGAAGGCCTTTGTTGATAACTTCATTGAAGATCCATCAGCCCTTGCCGAGCAACTTGTGGATACCTTTTCAGAATGCATTTCAATCAAGAAAACATGTGCTGTGCCTGCTGGATTCTGCATGAAGCTTTGGCATTGA 2202 43.37 MLVLGTAHDPSRYSKMSMEEKRNLVYEISDQPNASDLLQSWSRHEILEILCAEMGKERKYTGLTKLKIIENLLKIVSEKKSGSSEDVTDLDSQSSPCVYPKITKRQRKIDQPARLPVPANHIPISNTRSDSNIAVYCRNSACKATLNQEDRFCKRCSCCICYQYDDNKDPSLWLSCSSDPPFQDTSCGMSCHLECALKHEKSGISRGLRAGMEGTFCCLSCGKVNDLLGCWRKQLMKAKETRRVDILCYRLSLSKKLLVEVEKYQDVHQIVDEAVKKLEAEVGPLTGVPVGTGRGIVNRLSSGPEVQKLCSLAIDTLDSLLSTNILHQLPSSIIQDTNLVGNNFVRFEDVDATYLTVVVGTEDVSSGKTAGYRIWHRKACEIDYPMEPTCTLSQLNLRSVVRGLTPSSEYYFKAISFDGTGDLGMCEVQVSTATAREDNTDCLVTERCQSPVTNFSELSNPSSVEDETNNVIPCSDQTDSRTGSYLSYCKDSNKITTANLSKDAINCTDVSGRGTAEDSVSLLDEDHVTRKSSMLPDPSVSKLEDGHSSDVHIIEDTSMNNGSNSAIQEGTKCAPFVSSSEAGLPVTPCKMEILKDVLGRSGRLKSSSAKDRETGSGGEERQHGRTSKKRSAERQDADCAANGISDKDFEYYVKLIRWLECEGHIEKNFRQKFLTWYSLRATAQDVRIVKAFVDNFIEDPSALAEQLVDTFSECISIKKTCAVPAGFCMKLWH 733
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 1847121 1850622 - Carg15238-RA Car10g00371 155273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car10g00371 733 Coils Coil 261 281 - -
Car10g00371 733 MobiDBLite consensus disorder prediction 605 636 - -
Car10g00371 733 MobiDBLite consensus disorder prediction 602 636 - -
Car10g00371 733 MobiDBLite consensus disorder prediction 454 476 - -
Car10g00371 733 Pfam PHD - plant homeodomain finger protein 137 255 IPR032881 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car05g00633 Car10g00371 CCT
Car10g00371 Car11g00358 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car10g00371 Car-Chr10:1847121 Car10g00555 Car-Chr10:2810551 1.35E-116 dispersed
Car10g00371 Car-Chr10:1847121 Car11g00358 Car-Chr11:1959725 0 wgd
Car10g00371 Car-Chr10:1847121 Car05g00633 Car-Chr5:3806552 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car10g00371 - - csv:101220456 1244.18