Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car10g00382 ATGACAGCCCTCCACATTCTTGGCACCGAAACCGATATCTCGGAGGAGTTTTTGATAGCTCGAGTCATCGACCTCCATGGAAGCATCTCGAGGCTTGAAACCCTAAAGCCATGCAAGGAAGTGAACGGCCTCTTCACCAACCTAGTGAAATTGTGCATTTTGCCTTGTTCAATAGATGTCTCTACATTGGCACCTCATTTACAAGCCATTCGTGAGAGCCTCATACTTTTATGTGGCCGAGCCGAGGGGTTACTCGAGTTAGAATTCTCGACCATGCTCGGAAAAATCCCGAAACCTCTCAACAATCTTACTCTATTTCCATATTATGACAACTACATCAAATTAGCCCACCTTGAATACAAGATATTGATTGACAATGGAGTTGTGAATCCAAAAAAGGTAGCTTTTGTGGGGTCCGGTCCTCTTCCTCTAACTTCCATTATATTGGCCATGCAGCACATGAAGAACACGTATTTCGACAACTACGACGTCGATAGCATGGCAAATGAGGTGGCGGGAAAGATCGTGGCTTCGGACGGTGAGTTGGAGGGAAGAATGAAGTTTTGGACGAGGGATATTGTTGAGGTAGGAGAAGAGCTTGAGGGATACGATTGTGTGTTCTTGGCAGCTCTTGTGGGGTTGAACAAGGAAGATAAAGTGAAGATTTTAAGTCACTTGAGAAAGTATATGAAACAAGGTGGGGTTTTGGTTGTGAGAAGTGCTAGAGGAGGTCGAGCCTTTTTGTACCCCGTGGTTGAGGTCGCCGATATGGTTGGCTTTGACATTCTCTCTATTTTTCATCCCTCCGACGACGTCGTCAATTCCGTTCTCTTGGCTCGCAAGCCTATACTCCTATGA 858 45.69 MTALHILGTETDISEEFLIARVIDLHGSISRLETLKPCKEVNGLFTNLVKLCILPCSIDVSTLAPHLQAIRESLILLCGRAEGLLELEFSTMLGKIPKPLNNLTLFPYYDNYIKLAHLEYKILIDNGVVNPKKVAFVGSGPLPLTSIILAMQHMKNTYFDNYDVDSMANEVAGKIVASDGELEGRMKFWTRDIVEVGEELEGYDCVFLAALVGLNKEDKVKILSHLRKYMKQGGVLVVRSARGGRAFLYPVVEVADMVGFDILSIFHPSDDVVNSVLLARKPILL 285
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 1902024 1902881 + Carg15249-RA Car10g00382 155284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car10g00382 285 Pfam Nicotianamine synthase protein 15 282 IPR004298 GO:0030410|GO:0030418
Car10g00382 285 ProSiteProfiles Nicotianamine synthase (NAS)-like family profile. 11 285 IPR004298 GO:0030410|GO:0030418
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car05g00944 Car-Chr5:9107871 Car10g00382 Car-Chr10:1902024 1.09E-91 dispersed
Car10g00382 Car-Chr10:1902024 Car11g01035 Car-Chr11:7784098 2.55E-101 dispersed
Car10g00382 Car-Chr10:1902024 Car12g00985 Car-Chr12:9913211 2.34E-93 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car10g00382 K05953 - csv:101209464 453.751